Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.34■□□□□ 0.53
PTCRAQ6ISU1 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTCRAQ6ISU1 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.34■□□□□ 0.53
PTCRAQ6ISU1 OR7E47P-204ENST00000575924 449 ntBASIC18.34■□□□□ 0.53
PTCRAQ6ISU1 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.34■□□□□ 0.53
PTCRAQ6ISU1 GGTLC5P-201ENST00000617623 998 ntBASIC18.34■□□□□ 0.53
PTCRAQ6ISU1 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PTCRAQ6ISU1 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.34■□□□□ 0.53
PTCRAQ6ISU1 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.34■□□□□ 0.53
PTCRAQ6ISU1 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTCRAQ6ISU1 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.34■□□□□ 0.53
PTCRAQ6ISU1 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTCRAQ6ISU1 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTCRAQ6ISU1 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTCRAQ6ISU1 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
PTCRAQ6ISU1 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
PTCRAQ6ISU1 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.33■□□□□ 0.53
PTCRAQ6ISU1 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.33■□□□□ 0.53
PTCRAQ6ISU1 LINC01006-201ENST00000333319 2292 ntBASIC18.33■□□□□ 0.53
PTCRAQ6ISU1 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
PTCRAQ6ISU1 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PTCRAQ6ISU1 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
PTCRAQ6ISU1 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
PTCRAQ6ISU1 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.33■□□□□ 0.52
PTCRAQ6ISU1 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTCRAQ6ISU1 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTCRAQ6ISU1 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTCRAQ6ISU1 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC18.33■□□□□ 0.52
PTCRAQ6ISU1 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTCRAQ6ISU1 HLA-V-201ENST00000429037 534 ntBASIC18.33■□□□□ 0.52
PTCRAQ6ISU1 AC055876.3-201ENST00000431496 288 ntBASIC18.33■□□□□ 0.52
PTCRAQ6ISU1 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
PTCRAQ6ISU1 SIGLEC30P-201ENST00000455569 941 ntBASIC18.33■□□□□ 0.52
PTCRAQ6ISU1 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC18.33■□□□□ 0.52
PTCRAQ6ISU1 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.33■□□□□ 0.52
PTCRAQ6ISU1 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTCRAQ6ISU1 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PTCRAQ6ISU1 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PTCRAQ6ISU1 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.33■□□□□ 0.52
PTCRAQ6ISU1 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.33■□□□□ 0.52
PTCRAQ6ISU1 AL353135.1-201ENST00000606729 504 ntBASIC18.33■□□□□ 0.52
PTCRAQ6ISU1 AC138649.4-201ENST00000612222 287 ntBASIC18.33■□□□□ 0.52
PTCRAQ6ISU1 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTCRAQ6ISU1 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.33■□□□□ 0.52
PTCRAQ6ISU1 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PTCRAQ6ISU1 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
PTCRAQ6ISU1 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PTCRAQ6ISU1 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
PTCRAQ6ISU1 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.33■□□□□ 0.52
PTCRAQ6ISU1 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTCRAQ6ISU1 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTCRAQ6ISU1 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTCRAQ6ISU1 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.33■□□□□ 0.52
PTCRAQ6ISU1 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PTCRAQ6ISU1 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.32■□□□□ 0.52
PTCRAQ6ISU1 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTCRAQ6ISU1 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTCRAQ6ISU1 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.32■□□□□ 0.52
PTCRAQ6ISU1 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PTCRAQ6ISU1 PTCHD3P3-201ENST00000403073 906 ntBASIC18.32■□□□□ 0.52
PTCRAQ6ISU1 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.32■□□□□ 0.52
PTCRAQ6ISU1 TFAMP1-201ENST00000412727 736 ntBASIC18.32■□□□□ 0.52
PTCRAQ6ISU1 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.32■□□□□ 0.52
PTCRAQ6ISU1 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.32■□□□□ 0.52
PTCRAQ6ISU1 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.32■□□□□ 0.52
PTCRAQ6ISU1 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PTCRAQ6ISU1 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
PTCRAQ6ISU1 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.32■□□□□ 0.52
PTCRAQ6ISU1 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.32■□□□□ 0.52
PTCRAQ6ISU1 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.32■□□□□ 0.52
PTCRAQ6ISU1 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.32■□□□□ 0.52
PTCRAQ6ISU1 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.32■□□□□ 0.52
PTCRAQ6ISU1 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.32■□□□□ 0.52
PTCRAQ6ISU1 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC18.32■□□□□ 0.52
PTCRAQ6ISU1 AC009093.7-201ENST00000623853 1223 ntBASIC18.32■□□□□ 0.52
PTCRAQ6ISU1 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
PTCRAQ6ISU1 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.32■□□□□ 0.52
PTCRAQ6ISU1 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTCRAQ6ISU1 AC132938.5-201ENST00000624980 1813 ntBASIC18.32■□□□□ 0.52
PTCRAQ6ISU1 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PTCRAQ6ISU1 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.32■□□□□ 0.52
PTCRAQ6ISU1 SIRPAP1-201ENST00000448467 1770 ntBASIC18.32■□□□□ 0.52
PTCRAQ6ISU1 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PTCRAQ6ISU1 AL353593.2-201ENST00000602529 1483 ntBASIC18.32■□□□□ 0.52
PTCRAQ6ISU1 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTCRAQ6ISU1 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.31■□□□□ 0.52
PTCRAQ6ISU1 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTCRAQ6ISU1 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTCRAQ6ISU1 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC18.31■□□□□ 0.52
PTCRAQ6ISU1 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.31■□□□□ 0.52
PTCRAQ6ISU1 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.31■□□□□ 0.52
PTCRAQ6ISU1 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PTCRAQ6ISU1 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PTCRAQ6ISU1 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PTCRAQ6ISU1 KLF4P1-201ENST00000412782 1185 ntBASIC18.31■□□□□ 0.52
PTCRAQ6ISU1 AL627223.1-201ENST00000416693 442 ntBASIC18.31■□□□□ 0.52
PTCRAQ6ISU1 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.31■□□□□ 0.52
PTCRAQ6ISU1 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.31■□□□□ 0.52
PTCRAQ6ISU1 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.31■□□□□ 0.52
PTCRAQ6ISU1 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms