Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.25■□□□□ 0.35
RIF1Q5UIP0 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.25■□□□□ 0.35
RIF1Q5UIP0 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.25■□□□□ 0.35
RIF1Q5UIP0 AC112191.1-201ENST00000523689 701 ntBASIC17.25■□□□□ 0.35
RIF1Q5UIP0 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC17.25■□□□□ 0.35
RIF1Q5UIP0 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RIF1Q5UIP0 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RIF1Q5UIP0 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
RIF1Q5UIP0 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.25■□□□□ 0.35
RIF1Q5UIP0 AC099522.2-201ENST00000607001 744 ntBASIC17.25■□□□□ 0.35
RIF1Q5UIP0 Six3os1_5.1-201ENST00000611000 271 ntBASIC17.25■□□□□ 0.35
RIF1Q5UIP0 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.25■□□□□ 0.35
RIF1Q5UIP0 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RIF1Q5UIP0 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RIF1Q5UIP0 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
RIF1Q5UIP0 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.25■□□□□ 0.35
RIF1Q5UIP0 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RIF1Q5UIP0 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RIF1Q5UIP0 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RIF1Q5UIP0 HCG4-201ENST00000418983 998 ntBASIC17.25■□□□□ 0.35
RIF1Q5UIP0 SPDYE11-202ENST00000450699 704 ntBASIC17.25■□□□□ 0.35
RIF1Q5UIP0 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RIF1Q5UIP0 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.25■□□□□ 0.35
RIF1Q5UIP0 AC004890.2-204ENST00000481968 304 ntBASIC17.25■□□□□ 0.35
RIF1Q5UIP0 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.25■□□□□ 0.35
RIF1Q5UIP0 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.25■□□□□ 0.35
RIF1Q5UIP0 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.25■□□□□ 0.35
RIF1Q5UIP0 SPDYE9P-201ENST00000570642 692 ntBASIC17.25■□□□□ 0.35
RIF1Q5UIP0 AC017083.2-201ENST00000608069 979 ntBASIC17.25■□□□□ 0.35
RIF1Q5UIP0 SPDYE10P-202ENST00000612005 668 ntBASIC17.25■□□□□ 0.35
RIF1Q5UIP0 SPDYE8P-202ENST00000612377 668 ntBASIC17.25■□□□□ 0.35
RIF1Q5UIP0 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.25■□□□□ 0.35
RIF1Q5UIP0 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RIF1Q5UIP0 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RIF1Q5UIP0 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
RIF1Q5UIP0 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RIF1Q5UIP0 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RIF1Q5UIP0 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RIF1Q5UIP0 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.24■□□□□ 0.35
RIF1Q5UIP0 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RIF1Q5UIP0 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
RIF1Q5UIP0 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
RIF1Q5UIP0 PTPA-220ENST00000436883 532 ntTSL 4 BASIC17.24■□□□□ 0.35
RIF1Q5UIP0 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RIF1Q5UIP0 AC125807.1-201ENST00000483097 614 ntBASIC17.24■□□□□ 0.35
RIF1Q5UIP0 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.24■□□□□ 0.35
RIF1Q5UIP0 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.24■□□□□ 0.35
RIF1Q5UIP0 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.24■□□□□ 0.35
RIF1Q5UIP0 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.24■□□□□ 0.35
RIF1Q5UIP0 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.24■□□□□ 0.35
RIF1Q5UIP0 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RIF1Q5UIP0 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
RIF1Q5UIP0 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.24■□□□□ 0.35
RIF1Q5UIP0 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RIF1Q5UIP0 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RIF1Q5UIP0 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
RIF1Q5UIP0 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RIF1Q5UIP0 AC092580.3-201ENST00000430932 139 ntBASIC17.24■□□□□ 0.35
RIF1Q5UIP0 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RIF1Q5UIP0 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.24■□□□□ 0.35
RIF1Q5UIP0 AC019129.2-201ENST00000609837 1235 ntBASIC17.24■□□□□ 0.35
RIF1Q5UIP0 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.24■□□□□ 0.35
RIF1Q5UIP0 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.24■□□□□ 0.35
RIF1Q5UIP0 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.24■□□□□ 0.35
RIF1Q5UIP0 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.24■□□□□ 0.35
RIF1Q5UIP0 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RIF1Q5UIP0 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RIF1Q5UIP0 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.23■□□□□ 0.35
RIF1Q5UIP0 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC17.23■□□□□ 0.35
RIF1Q5UIP0 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RIF1Q5UIP0 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RIF1Q5UIP0 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RIF1Q5UIP0 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.23■□□□□ 0.35
RIF1Q5UIP0 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.23■□□□□ 0.35
RIF1Q5UIP0 KRT8P48-201ENST00000515599 1220 ntBASIC17.23■□□□□ 0.35
RIF1Q5UIP0 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.23■□□□□ 0.35
RIF1Q5UIP0 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RIF1Q5UIP0 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC17.23■□□□□ 0.35
RIF1Q5UIP0 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.23■□□□□ 0.35
RIF1Q5UIP0 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
RIF1Q5UIP0 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
RIF1Q5UIP0 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RIF1Q5UIP0 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RIF1Q5UIP0 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.23■□□□□ 0.35
RIF1Q5UIP0 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RIF1Q5UIP0 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.23■□□□□ 0.35
RIF1Q5UIP0 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RIF1Q5UIP0 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
RIF1Q5UIP0 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RIF1Q5UIP0 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.23■□□□□ 0.35
RIF1Q5UIP0 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
RIF1Q5UIP0 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RIF1Q5UIP0 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RIF1Q5UIP0 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RIF1Q5UIP0 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.23■□□□□ 0.35
RIF1Q5UIP0 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RIF1Q5UIP0 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RIF1Q5UIP0 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
RIF1Q5UIP0 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.23■□□□□ 0.35
RIF1Q5UIP0 GPS2P2-201ENST00000430745 888 ntBASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms