Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RSPO4Q2I0M5 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RSPO4Q2I0M5 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
RSPO4Q2I0M5 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.27■□□□□ 0.36
RSPO4Q2I0M5 UGT1A2P-201ENST00000454886 866 ntBASIC17.27■□□□□ 0.36
RSPO4Q2I0M5 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.27■□□□□ 0.36
RSPO4Q2I0M5 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.27■□□□□ 0.36
RSPO4Q2I0M5 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RSPO4Q2I0M5 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.27■□□□□ 0.36
RSPO4Q2I0M5 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.27■□□□□ 0.36
RSPO4Q2I0M5 AL358472.5-202ENST00000641448 1267 ntBASIC17.27■□□□□ 0.36
RSPO4Q2I0M5 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RSPO4Q2I0M5 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RSPO4Q2I0M5 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RSPO4Q2I0M5 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
RSPO4Q2I0M5 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RSPO4Q2I0M5 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.27■□□□□ 0.35
RSPO4Q2I0M5 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.27■□□□□ 0.35
RSPO4Q2I0M5 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
RSPO4Q2I0M5 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.27■□□□□ 0.35
RSPO4Q2I0M5 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RSPO4Q2I0M5 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.27■□□□□ 0.35
RSPO4Q2I0M5 KRT8P47-201ENST00000604727 1398 ntBASIC17.27■□□□□ 0.35
RSPO4Q2I0M5 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RSPO4Q2I0M5 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.26■□□□□ 0.35
RSPO4Q2I0M5 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.26■□□□□ 0.35
RSPO4Q2I0M5 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RSPO4Q2I0M5 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
RSPO4Q2I0M5 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RSPO4Q2I0M5 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.26■□□□□ 0.35
RSPO4Q2I0M5 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
RSPO4Q2I0M5 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.26■□□□□ 0.35
RSPO4Q2I0M5 FAM207CP-201ENST00000443486 507 ntBASIC17.26■□□□□ 0.35
RSPO4Q2I0M5 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RSPO4Q2I0M5 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
RSPO4Q2I0M5 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.26■□□□□ 0.35
RSPO4Q2I0M5 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RSPO4Q2I0M5 AL606495.2-201ENST00000605867 535 ntBASIC17.26■□□□□ 0.35
RSPO4Q2I0M5 REXO1L3P-201ENST00000622202 1288 ntBASIC17.26■□□□□ 0.35
RSPO4Q2I0M5 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RSPO4Q2I0M5 SIGLEC16-201ENST00000599858 1437 ntBASIC17.26■□□□□ 0.35
RSPO4Q2I0M5 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RSPO4Q2I0M5 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RSPO4Q2I0M5 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
RSPO4Q2I0M5 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RSPO4Q2I0M5 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
RSPO4Q2I0M5 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
RSPO4Q2I0M5 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RSPO4Q2I0M5 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RSPO4Q2I0M5 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.26■□□□□ 0.35
RSPO4Q2I0M5 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.26■□□□□ 0.35
RSPO4Q2I0M5 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RSPO4Q2I0M5 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.25■□□□□ 0.35
RSPO4Q2I0M5 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RSPO4Q2I0M5 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RSPO4Q2I0M5 AL121761.2-201ENST00000598007 1648 ntBASIC17.25■□□□□ 0.35
RSPO4Q2I0M5 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.25■□□□□ 0.35
RSPO4Q2I0M5 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RSPO4Q2I0M5 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.25■□□□□ 0.35
RSPO4Q2I0M5 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RSPO4Q2I0M5 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.25■□□□□ 0.35
RSPO4Q2I0M5 SPDYE21P-201ENST00000413323 827 ntBASIC17.25■□□□□ 0.35
RSPO4Q2I0M5 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.25■□□□□ 0.35
RSPO4Q2I0M5 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RSPO4Q2I0M5 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RSPO4Q2I0M5 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RSPO4Q2I0M5 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.25■□□□□ 0.35
RSPO4Q2I0M5 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.25■□□□□ 0.35
RSPO4Q2I0M5 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.25■□□□□ 0.35
RSPO4Q2I0M5 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.25■□□□□ 0.35
RSPO4Q2I0M5 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
RSPO4Q2I0M5 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.25■□□□□ 0.35
RSPO4Q2I0M5 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.25■□□□□ 0.35
RSPO4Q2I0M5 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.25■□□□□ 0.35
RSPO4Q2I0M5 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.25■□□□□ 0.35
RSPO4Q2I0M5 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.25■□□□□ 0.35
RSPO4Q2I0M5 AC027307.3-201ENST00000594262 1100 ntBASIC17.25■□□□□ 0.35
RSPO4Q2I0M5 AL353135.1-201ENST00000606729 504 ntBASIC17.25■□□□□ 0.35
RSPO4Q2I0M5 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
RSPO4Q2I0M5 MIR6799-201ENST00000620297 69 ntBASIC17.25■□□□□ 0.35
RSPO4Q2I0M5 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RSPO4Q2I0M5 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RSPO4Q2I0M5 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RSPO4Q2I0M5 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.25■□□□□ 0.35
RSPO4Q2I0M5 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RSPO4Q2I0M5 AC009102.3-201ENST00000623118 1491 ntBASIC17.24■□□□□ 0.35
RSPO4Q2I0M5 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RSPO4Q2I0M5 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
RSPO4Q2I0M5 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RSPO4Q2I0M5 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.24■□□□□ 0.35
RSPO4Q2I0M5 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.24■□□□□ 0.35
RSPO4Q2I0M5 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RSPO4Q2I0M5 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RSPO4Q2I0M5 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.24■□□□□ 0.35
RSPO4Q2I0M5 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
RSPO4Q2I0M5 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RSPO4Q2I0M5 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RSPO4Q2I0M5 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
RSPO4Q2I0M5 AC003669.1-201ENST00000334569 611 ntBASIC17.24■□□□□ 0.35
RSPO4Q2I0M5 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms