Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
HMGXB3Q12766 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
HMGXB3Q12766 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC31.23■■■□□ 2.59
HMGXB3Q12766 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC31.23■■■□□ 2.59
HMGXB3Q12766 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC31.23■■■□□ 2.59
HMGXB3Q12766 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC31.23■■■□□ 2.59
HMGXB3Q12766 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
HMGXB3Q12766 ESPNP-201ENST00000270691 2015 ntBASIC31.23■■■□□ 2.59
HMGXB3Q12766 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
HMGXB3Q12766 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC31.22■■■□□ 2.59
HMGXB3Q12766 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC31.22■■■□□ 2.59
HMGXB3Q12766 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
HMGXB3Q12766 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC31.22■■■□□ 2.59
HMGXB3Q12766 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC31.22■■■□□ 2.59
HMGXB3Q12766 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC31.22■■■□□ 2.59
HMGXB3Q12766 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
HMGXB3Q12766 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC31.22■■■□□ 2.59
HMGXB3Q12766 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC31.22■■■□□ 2.59
HMGXB3Q12766 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC31.21■■■□□ 2.59
HMGXB3Q12766 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
HMGXB3Q12766 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
HMGXB3Q12766 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC31.21■■■□□ 2.59
HMGXB3Q12766 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC31.21■■■□□ 2.59
HMGXB3Q12766 VMA21-202ENST00000370361 693 ntTSL 5 BASIC31.21■■■□□ 2.59
HMGXB3Q12766 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC31.21■■■□□ 2.59
HMGXB3Q12766 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC31.21■■■□□ 2.59
HMGXB3Q12766 KRT8P48-201ENST00000515599 1220 ntBASIC31.21■■■□□ 2.59
HMGXB3Q12766 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC31.21■■■□□ 2.59
HMGXB3Q12766 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC31.21■■■□□ 2.59
HMGXB3Q12766 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC31.21■■■□□ 2.59
HMGXB3Q12766 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC31.21■■■□□ 2.59
HMGXB3Q12766 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
HMGXB3Q12766 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
HMGXB3Q12766 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC31.21■■■□□ 2.59
HMGXB3Q12766 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
HMGXB3Q12766 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC31.21■■■□□ 2.59
HMGXB3Q12766 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
HMGXB3Q12766 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC31.21■■■□□ 2.59
HMGXB3Q12766 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC31.2■■■□□ 2.59
HMGXB3Q12766 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
HMGXB3Q12766 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
HMGXB3Q12766 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
HMGXB3Q12766 ACTG1P4-201ENST00000425123 1122 ntBASIC31.2■■■□□ 2.59
HMGXB3Q12766 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC31.2■■■□□ 2.59
HMGXB3Q12766 TIMM8BP1-201ENST00000452384 211 ntBASIC31.2■■■□□ 2.59
HMGXB3Q12766 DUTP2-201ENST00000519164 463 ntBASIC31.2■■■□□ 2.59
HMGXB3Q12766 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC31.2■■■□□ 2.59
HMGXB3Q12766 RPL28-209ENST00000560055 670 ntTSL 3 BASIC31.2■■■□□ 2.59
HMGXB3Q12766 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
HMGXB3Q12766 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
HMGXB3Q12766 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC31.2■■■□□ 2.59
HMGXB3Q12766 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC31.2■■■□□ 2.58
HMGXB3Q12766 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
HMGXB3Q12766 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC31.19■■■□□ 2.58
HMGXB3Q12766 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
HMGXB3Q12766 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC31.19■■■□□ 2.58
HMGXB3Q12766 AC055876.3-201ENST00000431496 288 ntBASIC31.19■■■□□ 2.58
HMGXB3Q12766 OARD1-208ENST00000469104 704 ntTSL 2 BASIC31.19■■■□□ 2.58
HMGXB3Q12766 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC31.19■■■□□ 2.58
HMGXB3Q12766 AC138649.4-201ENST00000612222 287 ntBASIC31.19■■■□□ 2.58
HMGXB3Q12766 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC31.19■■■□□ 2.58
HMGXB3Q12766 AC005082.1-201ENST00000413042 2259 ntBASIC31.19■■■□□ 2.58
HMGXB3Q12766 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC31.19■■■□□ 2.58
HMGXB3Q12766 AC093484.2-201ENST00000580996 2166 ntBASIC31.19■■■□□ 2.58
HMGXB3Q12766 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
HMGXB3Q12766 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC31.19■■■□□ 2.58
HMGXB3Q12766 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC31.19■■■□□ 2.58
HMGXB3Q12766 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
HMGXB3Q12766 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
HMGXB3Q12766 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
HMGXB3Q12766 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
HMGXB3Q12766 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
HMGXB3Q12766 GK-202ENST00000378941 458 ntTSL 3 BASIC31.19■■■□□ 2.58
HMGXB3Q12766 WRB-204ENST00000398753 699 ntTSL 3 BASIC31.19■■■□□ 2.58
HMGXB3Q12766 LINC00982-205ENST00000420957 435 ntBASIC31.19■■■□□ 2.58
HMGXB3Q12766 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC31.19■■■□□ 2.58
HMGXB3Q12766 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
HMGXB3Q12766 AC026120.1-201ENST00000611536 926 ntBASIC31.19■■■□□ 2.58
HMGXB3Q12766 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC31.18■■■□□ 2.58
HMGXB3Q12766 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
HMGXB3Q12766 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
HMGXB3Q12766 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC31.18■■■□□ 2.58
HMGXB3Q12766 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC31.18■■■□□ 2.58
HMGXB3Q12766 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC31.18■■■□□ 2.58
HMGXB3Q12766 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
HMGXB3Q12766 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC31.18■■■□□ 2.58
HMGXB3Q12766 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC31.18■■■□□ 2.58
HMGXB3Q12766 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
HMGXB3Q12766 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC31.18■■■□□ 2.58
HMGXB3Q12766 CYP51A1P2-201ENST00000419457 1499 ntBASIC31.18■■■□□ 2.58
HMGXB3Q12766 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
HMGXB3Q12766 GRAP-202ENST00000395635 834 ntTSL 2 BASIC31.18■■■□□ 2.58
HMGXB3Q12766 KRT18P32-201ENST00000424695 1287 ntBASIC31.18■■■□□ 2.58
HMGXB3Q12766 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC31.18■■■□□ 2.58
HMGXB3Q12766 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC31.18■■■□□ 2.58
HMGXB3Q12766 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC31.18■■■□□ 2.58
HMGXB3Q12766 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
HMGXB3Q12766 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC31.17■■■□□ 2.58
HMGXB3Q12766 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC31.17■■■□□ 2.58
HMGXB3Q12766 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC31.17■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms