Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC25.13■■□□□ 1.61
CPS1P31327 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC25.13■■□□□ 1.61
CPS1P31327 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC25.13■■□□□ 1.61
CPS1P31327 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CPS1P31327 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC25.12■■□□□ 1.61
CPS1P31327 AC096633.1-201ENST00000422446 749 ntBASIC25.12■■□□□ 1.61
CPS1P31327 AC074386.1-202ENST00000463561 864 ntBASIC25.12■■□□□ 1.61
CPS1P31327 NOP2-220ENST00000545915 630 ntTSL 2 BASIC25.12■■□□□ 1.61
CPS1P31327 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC25.12■■□□□ 1.61
CPS1P31327 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC25.12■■□□□ 1.61
CPS1P31327 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CPS1P31327 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC25.12■■□□□ 1.61
CPS1P31327 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
CPS1P31327 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC25.12■■□□□ 1.61
CPS1P31327 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CPS1P31327 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC25.12■■□□□ 1.61
CPS1P31327 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CPS1P31327 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
CPS1P31327 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CPS1P31327 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC25.12■■□□□ 1.61
CPS1P31327 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CPS1P31327 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC25.12■■□□□ 1.61
CPS1P31327 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC25.12■■□□□ 1.61
CPS1P31327 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC25.12■■□□□ 1.61
CPS1P31327 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC25.12■■□□□ 1.61
CPS1P31327 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC25.12■■□□□ 1.61
CPS1P31327 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC25.12■■□□□ 1.61
CPS1P31327 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
CPS1P31327 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CPS1P31327 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CPS1P31327 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CPS1P31327 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CPS1P31327 AL121761.2-201ENST00000598007 1648 ntBASIC25.11■■□□□ 1.61
CPS1P31327 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CPS1P31327 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CPS1P31327 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
CPS1P31327 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
CPS1P31327 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC25.11■■□□□ 1.61
CPS1P31327 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC25.11■■□□□ 1.61
CPS1P31327 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC25.11■■□□□ 1.61
CPS1P31327 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC25.11■■□□□ 1.61
CPS1P31327 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC25.11■■□□□ 1.61
CPS1P31327 AC051619.7-201ENST00000568314 623 ntBASIC25.11■■□□□ 1.61
CPS1P31327 AC068137.2-201ENST00000605408 478 ntBASIC25.11■■□□□ 1.61
CPS1P31327 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC25.11■■□□□ 1.61
CPS1P31327 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CPS1P31327 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CPS1P31327 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
CPS1P31327 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CPS1P31327 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CPS1P31327 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC25.1■■□□□ 1.61
CPS1P31327 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC25.1■■□□□ 1.61
CPS1P31327 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CPS1P31327 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
CPS1P31327 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC25.1■■□□□ 1.61
CPS1P31327 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
CPS1P31327 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CPS1P31327 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC25.1■■□□□ 1.61
CPS1P31327 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC25.1■■□□□ 1.61
CPS1P31327 TSPY16P-201ENST00000449843 468 ntBASIC25.1■■□□□ 1.61
CPS1P31327 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC25.1■■□□□ 1.61
CPS1P31327 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CPS1P31327 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CPS1P31327 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CPS1P31327 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC25.1■■□□□ 1.61
CPS1P31327 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CPS1P31327 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
CPS1P31327 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CPS1P31327 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
CPS1P31327 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CPS1P31327 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
CPS1P31327 BASP1P1-201ENST00000430708 665 ntBASIC25.09■■□□□ 1.61
CPS1P31327 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC25.09■■□□□ 1.61
CPS1P31327 AC122714.2-201ENST00000502787 707 ntBASIC25.09■■□□□ 1.61
CPS1P31327 AP005018.1-201ENST00000525475 301 ntBASIC25.09■■□□□ 1.61
CPS1P31327 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC25.09■■□□□ 1.61
CPS1P31327 COX11-202ENST00000571584 1108 ntTSL 2 BASIC25.09■■□□□ 1.61
CPS1P31327 AC008761.3-201ENST00000624803 892 ntBASIC25.09■■□□□ 1.61
CPS1P31327 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
CPS1P31327 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CPS1P31327 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CPS1P31327 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CPS1P31327 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
CPS1P31327 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
CPS1P31327 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CPS1P31327 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CPS1P31327 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC25.08■■□□□ 1.61
CPS1P31327 CNN2P2-201ENST00000443536 909 ntBASIC25.08■■□□□ 1.61
CPS1P31327 CNN2P3-201ENST00000450201 906 ntBASIC25.08■■□□□ 1.61
CPS1P31327 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CPS1P31327 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC25.08■■□□□ 1.61
CPS1P31327 AL136317.3-201ENST00000618497 906 ntBASIC25.08■■□□□ 1.61
CPS1P31327 REXO1L3P-201ENST00000622202 1288 ntBASIC25.08■■□□□ 1.61
CPS1P31327 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
CPS1P31327 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
CPS1P31327 AC093010.1-201ENST00000473625 1624 ntBASIC25.08■■□□□ 1.61
CPS1P31327 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CPS1P31327 AC005082.1-201ENST00000413042 2259 ntBASIC25.08■■□□□ 1.61
CPS1P31327 BSG-215ENST00000618006 1329 ntTSL 2 BASIC25.08■■□□□ 1.6
CPS1P31327 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms