Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 UPF3AP3-201ENST00000420996 769 ntBASIC15.01□□□□□ -0.01
ABCA1O95477 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.01□□□□□ -0.01
ABCA1O95477 RPS8P6-201ENST00000426177 609 ntBASIC15.01□□□□□ -0.01
ABCA1O95477 AC004832.2-201ENST00000426397 482 ntBASIC15.01□□□□□ -0.01
ABCA1O95477 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.01□□□□□ -0.01
ABCA1O95477 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.01□□□□□ -0.01
ABCA1O95477 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.01□□□□□ -0.01
ABCA1O95477 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC15.01□□□□□ -0.01
ABCA1O95477 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.01□□□□□ -0.01
ABCA1O95477 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
ABCA1O95477 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
ABCA1O95477 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.01□□□□□ -0.01
ABCA1O95477 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
ABCA1O95477 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ABCA1O95477 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
ABCA1O95477 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
ABCA1O95477 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
ABCA1O95477 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC15□□□□□ -0.01
ABCA1O95477 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
ABCA1O95477 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC15□□□□□ -0.01
ABCA1O95477 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
ABCA1O95477 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC15□□□□□ -0.01
ABCA1O95477 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC15□□□□□ -0.01
ABCA1O95477 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC15□□□□□ -0.01
ABCA1O95477 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC15□□□□□ -0.01
ABCA1O95477 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
ABCA1O95477 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
ABCA1O95477 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ABCA1O95477 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
ABCA1O95477 RPSAP43-201ENST00000402237 625 ntBASIC15□□□□□ -0.01
ABCA1O95477 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15□□□□□ -0.01
ABCA1O95477 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15□□□□□ -0.01
ABCA1O95477 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15□□□□□ -0.01
ABCA1O95477 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15□□□□□ -0.01
ABCA1O95477 AC008735.5-201ENST00000623544 497 ntBASIC15□□□□□ -0.01
ABCA1O95477 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15□□□□□ -0.01
ABCA1O95477 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
ABCA1O95477 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ABCA1O95477 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
ABCA1O95477 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ABCA1O95477 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
ABCA1O95477 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC15□□□□□ -0.01
ABCA1O95477 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
ABCA1O95477 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15□□□□□ -0.01
ABCA1O95477 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ABCA1O95477 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
ABCA1O95477 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
ABCA1O95477 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ABCA1O95477 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ABCA1O95477 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15□□□□□ -0.01
ABCA1O95477 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ABCA1O95477 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
ABCA1O95477 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
ABCA1O95477 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15□□□□□ -0.01
ABCA1O95477 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15□□□□□ -0.01
ABCA1O95477 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15□□□□□ -0.01
ABCA1O95477 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15□□□□□ -0.01
ABCA1O95477 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15□□□□□ -0.01
ABCA1O95477 AL138831.2-201ENST00000606564 490 ntBASIC15□□□□□ -0.01
ABCA1O95477 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15□□□□□ -0.01
ABCA1O95477 FAM215A-202ENST00000632077 792 ntBASIC15□□□□□ -0.01
ABCA1O95477 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15□□□□□ -0.01
ABCA1O95477 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15□□□□□ -0.01
ABCA1O95477 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
ABCA1O95477 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
ABCA1O95477 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC15□□□□□ -0.01
ABCA1O95477 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ABCA1O95477 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ABCA1O95477 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
ABCA1O95477 HEIH-201ENST00000623091 1652 ntBASIC15□□□□□ -0.01
ABCA1O95477 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ABCA1O95477 HLA-J-201ENST00000462773 1622 ntBASIC14.99□□□□□ -0.01
ABCA1O95477 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC14.99□□□□□ -0.01
ABCA1O95477 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
ABCA1O95477 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ABCA1O95477 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC14.99□□□□□ -0.01
ABCA1O95477 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ABCA1O95477 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ABCA1O95477 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ABCA1O95477 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.99□□□□□ -0.01
ABCA1O95477 AC021087.4-201ENST00000563761 564 ntBASIC14.99□□□□□ -0.01
ABCA1O95477 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC14.99□□□□□ -0.01
ABCA1O95477 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.99□□□□□ -0.01
ABCA1O95477 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.99□□□□□ -0.01
ABCA1O95477 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.99□□□□□ -0.01
ABCA1O95477 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC14.99□□□□□ -0.01
ABCA1O95477 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
ABCA1O95477 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
ABCA1O95477 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ABCA1O95477 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ABCA1O95477 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
ABCA1O95477 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC14.99□□□□□ -0.01
ABCA1O95477 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ABCA1O95477 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ABCA1O95477 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ABCA1O95477 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ABCA1O95477 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ABCA1O95477 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.99□□□□□ -0.01
ABCA1O95477 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ABCA1O95477 NFYC-AS1-201ENST00000606277 1687 ntBASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms