Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.85■□□□□ 0.93
CTNND1O60716 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTNND1O60716 BX323043.1-201ENST00000641006 1765 ntBASIC20.85■□□□□ 0.93
CTNND1O60716 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC20.85■□□□□ 0.93
CTNND1O60716 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTNND1O60716 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTNND1O60716 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CTNND1O60716 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
CTNND1O60716 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC20.85■□□□□ 0.93
CTNND1O60716 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC20.85■□□□□ 0.93
CTNND1O60716 AC073621.1-201ENST00000392730 636 ntBASIC20.85■□□□□ 0.93
CTNND1O60716 GPX1P2-201ENST00000429271 606 ntBASIC20.85■□□□□ 0.93
CTNND1O60716 CRCP-205ENST00000431089 942 ntTSL 2 BASIC20.85■□□□□ 0.93
CTNND1O60716 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC20.85■□□□□ 0.93
CTNND1O60716 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20.85■□□□□ 0.93
CTNND1O60716 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CTNND1O60716 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.85■□□□□ 0.93
CTNND1O60716 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.85■□□□□ 0.93
CTNND1O60716 AC010327.4-202ENST00000591484 748 ntBASIC20.85■□□□□ 0.93
CTNND1O60716 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC20.85■□□□□ 0.93
CTNND1O60716 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.85■□□□□ 0.93
CTNND1O60716 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CTNND1O60716 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.85■□□□□ 0.93
CTNND1O60716 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTNND1O60716 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC20.85■□□□□ 0.93
CTNND1O60716 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
CTNND1O60716 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTNND1O60716 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTNND1O60716 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTNND1O60716 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTNND1O60716 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTNND1O60716 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.84■□□□□ 0.93
CTNND1O60716 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTNND1O60716 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
CTNND1O60716 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTNND1O60716 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTNND1O60716 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTNND1O60716 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CTNND1O60716 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.84■□□□□ 0.93
CTNND1O60716 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTNND1O60716 PMP22-202ENST00000395936 816 ntTSL 3 BASIC20.84■□□□□ 0.93
CTNND1O60716 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CTNND1O60716 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC20.84■□□□□ 0.93
CTNND1O60716 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC20.84■□□□□ 0.93
CTNND1O60716 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.84■□□□□ 0.93
CTNND1O60716 DNAJB3-201ENST00000446806 729 ntBASIC20.84■□□□□ 0.93
CTNND1O60716 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC20.84■□□□□ 0.93
CTNND1O60716 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC20.84■□□□□ 0.93
CTNND1O60716 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTNND1O60716 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC20.84■□□□□ 0.93
CTNND1O60716 HOTTIP_1.1-201ENST00000620415 57 ntBASIC20.84■□□□□ 0.93
CTNND1O60716 AC005593.1-201ENST00000624894 515 ntBASIC20.84■□□□□ 0.93
CTNND1O60716 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC20.84■□□□□ 0.93
CTNND1O60716 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CTNND1O60716 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTNND1O60716 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTNND1O60716 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTNND1O60716 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
CTNND1O60716 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.84■□□□□ 0.93
CTNND1O60716 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.84■□□□□ 0.93
CTNND1O60716 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTNND1O60716 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.83■□□□□ 0.93
CTNND1O60716 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CTNND1O60716 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CTNND1O60716 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CTNND1O60716 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CTNND1O60716 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC20.83■□□□□ 0.93
CTNND1O60716 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC20.83■□□□□ 0.93
CTNND1O60716 AC004832.2-201ENST00000426397 482 ntBASIC20.83■□□□□ 0.93
CTNND1O60716 AC007967.2-201ENST00000432613 625 ntBASIC20.83■□□□□ 0.93
CTNND1O60716 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.83■□□□□ 0.93
CTNND1O60716 AC112482.1-201ENST00000492080 688 ntBASIC20.83■□□□□ 0.93
CTNND1O60716 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC20.83■□□□□ 0.93
CTNND1O60716 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.83■□□□□ 0.93
CTNND1O60716 MIR3687-2-201ENST00000577708 61 ntBASIC20.83■□□□□ 0.93
CTNND1O60716 MIR3687-1-201ENST00000614492 61 ntBASIC20.83■□□□□ 0.93
CTNND1O60716 AC073592.5-201ENST00000624854 528 ntBASIC20.83■□□□□ 0.93
CTNND1O60716 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CTNND1O60716 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CTNND1O60716 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CTNND1O60716 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.83■□□□□ 0.92
CTNND1O60716 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CTNND1O60716 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTNND1O60716 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CTNND1O60716 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CTNND1O60716 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CTNND1O60716 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CTNND1O60716 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTNND1O60716 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CTNND1O60716 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTNND1O60716 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC20.82■□□□□ 0.92
CTNND1O60716 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CTNND1O60716 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
CTNND1O60716 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CTNND1O60716 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC20.82■□□□□ 0.92
CTNND1O60716 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC20.82■□□□□ 0.92
CTNND1O60716 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CTNND1O60716 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTNND1O60716 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTNND1O60716 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms