Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 GMCL1P1-201ENST00000463439 1581 ntBASIC17.3■□□□□ 0.36
RNF103-CHMP3A0A140T963 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF103-CHMP3A0A140T963 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF103-CHMP3A0A140T963 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.3■□□□□ 0.36
RNF103-CHMP3A0A140T963 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF103-CHMP3A0A140T963 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF103-CHMP3A0A140T963 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
RNF103-CHMP3A0A140T963 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF103-CHMP3A0A140T963 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.3■□□□□ 0.36
RNF103-CHMP3A0A140T963 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF103-CHMP3A0A140T963 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF103-CHMP3A0A140T963 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RNF103-CHMP3A0A140T963 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF103-CHMP3A0A140T963 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
RNF103-CHMP3A0A140T963 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF103-CHMP3A0A140T963 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF103-CHMP3A0A140T963 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
RNF103-CHMP3A0A140T963 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF103-CHMP3A0A140T963 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RNF103-CHMP3A0A140T963 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF103-CHMP3A0A140T963 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF103-CHMP3A0A140T963 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.3■□□□□ 0.36
RNF103-CHMP3A0A140T963 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF103-CHMP3A0A140T963 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF103-CHMP3A0A140T963 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF103-CHMP3A0A140T963 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RNF103-CHMP3A0A140T963 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF103-CHMP3A0A140T963 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF103-CHMP3A0A140T963 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF103-CHMP3A0A140T963 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RNF103-CHMP3A0A140T963 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RNF103-CHMP3A0A140T963 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF103-CHMP3A0A140T963 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RNF103-CHMP3A0A140T963 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF103-CHMP3A0A140T963 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF103-CHMP3A0A140T963 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.29■□□□□ 0.36
RNF103-CHMP3A0A140T963 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
RNF103-CHMP3A0A140T963 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF103-CHMP3A0A140T963 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.29■□□□□ 0.36
RNF103-CHMP3A0A140T963 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF103-CHMP3A0A140T963 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.29■□□□□ 0.36
RNF103-CHMP3A0A140T963 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF103-CHMP3A0A140T963 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF103-CHMP3A0A140T963 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
RNF103-CHMP3A0A140T963 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF103-CHMP3A0A140T963 AL023803.3-201ENST00000615559 522 ntBASIC17.29■□□□□ 0.36
RNF103-CHMP3A0A140T963 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RNF103-CHMP3A0A140T963 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
RNF103-CHMP3A0A140T963 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF103-CHMP3A0A140T963 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF103-CHMP3A0A140T963 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF103-CHMP3A0A140T963 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF103-CHMP3A0A140T963 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.29■□□□□ 0.36
RNF103-CHMP3A0A140T963 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF103-CHMP3A0A140T963 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF103-CHMP3A0A140T963 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF103-CHMP3A0A140T963 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RNF103-CHMP3A0A140T963 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF103-CHMP3A0A140T963 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF103-CHMP3A0A140T963 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF103-CHMP3A0A140T963 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RNF103-CHMP3A0A140T963 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RNF103-CHMP3A0A140T963 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
RNF103-CHMP3A0A140T963 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF103-CHMP3A0A140T963 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF103-CHMP3A0A140T963 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.28■□□□□ 0.36
RNF103-CHMP3A0A140T963 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF103-CHMP3A0A140T963 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF103-CHMP3A0A140T963 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF103-CHMP3A0A140T963 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF103-CHMP3A0A140T963 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF103-CHMP3A0A140T963 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF103-CHMP3A0A140T963 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF103-CHMP3A0A140T963 AL390955.1-201ENST00000428694 934 ntBASIC17.28■□□□□ 0.36
RNF103-CHMP3A0A140T963 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.28■□□□□ 0.36
RNF103-CHMP3A0A140T963 CCR12P-201ENST00000446203 998 ntBASIC17.28■□□□□ 0.36
RNF103-CHMP3A0A140T963 TSPY17P-201ENST00000450329 467 ntBASIC17.28■□□□□ 0.36
RNF103-CHMP3A0A140T963 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RNF103-CHMP3A0A140T963 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF103-CHMP3A0A140T963 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF103-CHMP3A0A140T963 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RNF103-CHMP3A0A140T963 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.28■□□□□ 0.36
RNF103-CHMP3A0A140T963 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF103-CHMP3A0A140T963 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF103-CHMP3A0A140T963 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF103-CHMP3A0A140T963 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF103-CHMP3A0A140T963 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
RNF103-CHMP3A0A140T963 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF103-CHMP3A0A140T963 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RNF103-CHMP3A0A140T963 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF103-CHMP3A0A140T963 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RNF103-CHMP3A0A140T963 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
RNF103-CHMP3A0A140T963 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF103-CHMP3A0A140T963 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RNF103-CHMP3A0A140T963 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF103-CHMP3A0A140T963 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF103-CHMP3A0A140T963 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RNF103-CHMP3A0A140T963 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RNF103-CHMP3A0A140T963 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RNF103-CHMP3A0A140T963 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms