Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC26.48■■□□□ 1.83
SHANK2Q9UPX8 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
SHANK2Q9UPX8 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
SHANK2Q9UPX8 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
SHANK2Q9UPX8 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC26.48■■□□□ 1.83
SHANK2Q9UPX8 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC26.47■■□□□ 1.83
SHANK2Q9UPX8 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
SHANK2Q9UPX8 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SHANK2Q9UPX8 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
SHANK2Q9UPX8 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC26.47■■□□□ 1.83
SHANK2Q9UPX8 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
SHANK2Q9UPX8 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC26.47■■□□□ 1.83
SHANK2Q9UPX8 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC26.47■■□□□ 1.83
SHANK2Q9UPX8 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
SHANK2Q9UPX8 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
SHANK2Q9UPX8 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC26.47■■□□□ 1.83
SHANK2Q9UPX8 AC008667.4-201ENST00000607370 168 ntBASIC26.47■■□□□ 1.83
SHANK2Q9UPX8 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
SHANK2Q9UPX8 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC26.47■■□□□ 1.83
SHANK2Q9UPX8 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC26.47■■□□□ 1.83
SHANK2Q9UPX8 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
SHANK2Q9UPX8 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
SHANK2Q9UPX8 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
SHANK2Q9UPX8 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SHANK2Q9UPX8 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC26.46■■□□□ 1.83
SHANK2Q9UPX8 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
SHANK2Q9UPX8 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC26.46■■□□□ 1.83
SHANK2Q9UPX8 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC26.46■■□□□ 1.83
SHANK2Q9UPX8 DNAJB3-202ENST00000449667 1266 ntBASIC26.46■■□□□ 1.83
SHANK2Q9UPX8 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
SHANK2Q9UPX8 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC26.46■■□□□ 1.83
SHANK2Q9UPX8 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC26.46■■□□□ 1.83
SHANK2Q9UPX8 AC002310.6-201ENST00000624451 1377 ntBASIC26.46■■□□□ 1.83
SHANK2Q9UPX8 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC26.46■■□□□ 1.83
SHANK2Q9UPX8 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC26.46■■□□□ 1.83
SHANK2Q9UPX8 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
SHANK2Q9UPX8 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC26.46■■□□□ 1.83
SHANK2Q9UPX8 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SHANK2Q9UPX8 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.83
SHANK2Q9UPX8 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC26.45■■□□□ 1.82
SHANK2Q9UPX8 LBH-203ENST00000404397 543 ntTSL 4 BASIC26.45■■□□□ 1.82
SHANK2Q9UPX8 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
SHANK2Q9UPX8 NKTR-203ENST00000442970 646 ntTSL 2 BASIC26.45■■□□□ 1.82
SHANK2Q9UPX8 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC26.45■■□□□ 1.82
SHANK2Q9UPX8 IGHV3-65-201ENST00000523210 341 ntBASIC26.45■■□□□ 1.82
SHANK2Q9UPX8 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SHANK2Q9UPX8 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
SHANK2Q9UPX8 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC26.45■■□□□ 1.82
SHANK2Q9UPX8 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
SHANK2Q9UPX8 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC26.45■■□□□ 1.82
SHANK2Q9UPX8 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SHANK2Q9UPX8 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SHANK2Q9UPX8 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC26.45■■□□□ 1.82
SHANK2Q9UPX8 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC26.44■■□□□ 1.82
SHANK2Q9UPX8 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC26.44■■□□□ 1.82
SHANK2Q9UPX8 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SHANK2Q9UPX8 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
SHANK2Q9UPX8 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC26.44■■□□□ 1.82
SHANK2Q9UPX8 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC26.44■■□□□ 1.82
SHANK2Q9UPX8 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC26.44■■□□□ 1.82
SHANK2Q9UPX8 HTR5BP-201ENST00000430851 1154 ntBASIC26.44■■□□□ 1.82
SHANK2Q9UPX8 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC26.44■■□□□ 1.82
SHANK2Q9UPX8 ALG1L5P-201ENST00000482043 771 ntBASIC26.44■■□□□ 1.82
SHANK2Q9UPX8 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC26.44■■□□□ 1.82
SHANK2Q9UPX8 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC26.44■■□□□ 1.82
SHANK2Q9UPX8 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SHANK2Q9UPX8 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC26.44■■□□□ 1.82
SHANK2Q9UPX8 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SHANK2Q9UPX8 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC26.44■■□□□ 1.82
SHANK2Q9UPX8 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
SHANK2Q9UPX8 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC26.44■■□□□ 1.82
SHANK2Q9UPX8 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SHANK2Q9UPX8 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
SHANK2Q9UPX8 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SHANK2Q9UPX8 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
SHANK2Q9UPX8 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SHANK2Q9UPX8 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC26.43■■□□□ 1.82
SHANK2Q9UPX8 RPS15P9-201ENST00000494093 319 ntBASIC26.43■■□□□ 1.82
SHANK2Q9UPX8 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC26.43■■□□□ 1.82
SHANK2Q9UPX8 AC109462.3-201ENST00000573934 613 ntBASIC26.43■■□□□ 1.82
SHANK2Q9UPX8 MIR3687-2-201ENST00000577708 61 ntBASIC26.43■■□□□ 1.82
SHANK2Q9UPX8 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC26.43■■□□□ 1.82
SHANK2Q9UPX8 MIR3687-1-201ENST00000614492 61 ntBASIC26.43■■□□□ 1.82
SHANK2Q9UPX8 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC26.43■■□□□ 1.82
SHANK2Q9UPX8 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC26.43■■□□□ 1.82
SHANK2Q9UPX8 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SHANK2Q9UPX8 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SHANK2Q9UPX8 GPR89P-201ENST00000407924 1495 ntBASIC26.43■■□□□ 1.82
SHANK2Q9UPX8 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC26.43■■□□□ 1.82
SHANK2Q9UPX8 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
SHANK2Q9UPX8 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
SHANK2Q9UPX8 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
SHANK2Q9UPX8 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC26.43■■□□□ 1.82
SHANK2Q9UPX8 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
SHANK2Q9UPX8 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SHANK2Q9UPX8 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
SHANK2Q9UPX8 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SHANK2Q9UPX8 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
SHANK2Q9UPX8 CYMP-203ENST00000474680 1263 ntBASIC26.42■■□□□ 1.82
SHANK2Q9UPX8 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC26.42■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms