Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
UPF3BQ9BZI7 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
UPF3BQ9BZI7 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
UPF3BQ9BZI7 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
UPF3BQ9BZI7 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
UPF3BQ9BZI7 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
UPF3BQ9BZI7 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
UPF3BQ9BZI7 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
UPF3BQ9BZI7 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
UPF3BQ9BZI7 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC21.4■■□□□ 1.02
UPF3BQ9BZI7 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC21.4■■□□□ 1.02
UPF3BQ9BZI7 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
UPF3BQ9BZI7 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
UPF3BQ9BZI7 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
UPF3BQ9BZI7 AC141586.5-201ENST00000624546 2050 ntBASIC21.4■■□□□ 1.02
UPF3BQ9BZI7 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
UPF3BQ9BZI7 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC21.4■■□□□ 1.02
UPF3BQ9BZI7 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC21.4■■□□□ 1.02
UPF3BQ9BZI7 RASA4DP-201ENST00000460726 1199 ntBASIC21.4■■□□□ 1.02
UPF3BQ9BZI7 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
UPF3BQ9BZI7 WDR88-203ENST00000592765 651 ntTSL 5 BASIC21.4■■□□□ 1.02
UPF3BQ9BZI7 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
UPF3BQ9BZI7 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
UPF3BQ9BZI7 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
UPF3BQ9BZI7 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC21.4■■□□□ 1.02
UPF3BQ9BZI7 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
UPF3BQ9BZI7 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
UPF3BQ9BZI7 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
UPF3BQ9BZI7 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
UPF3BQ9BZI7 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC21.4■■□□□ 1.02
UPF3BQ9BZI7 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
UPF3BQ9BZI7 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
UPF3BQ9BZI7 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.02
UPF3BQ9BZI7 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
UPF3BQ9BZI7 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
UPF3BQ9BZI7 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
UPF3BQ9BZI7 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC21.39■■□□□ 1.02
UPF3BQ9BZI7 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.02
UPF3BQ9BZI7 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
UPF3BQ9BZI7 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
UPF3BQ9BZI7 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC21.39■■□□□ 1.01
UPF3BQ9BZI7 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC21.39■■□□□ 1.01
UPF3BQ9BZI7 SPDYE15P-201ENST00000424157 909 ntBASIC21.39■■□□□ 1.01
UPF3BQ9BZI7 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC21.39■■□□□ 1.01
UPF3BQ9BZI7 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC21.39■■□□□ 1.01
UPF3BQ9BZI7 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
UPF3BQ9BZI7 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC21.39■■□□□ 1.01
UPF3BQ9BZI7 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
UPF3BQ9BZI7 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
UPF3BQ9BZI7 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
UPF3BQ9BZI7 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
UPF3BQ9BZI7 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
UPF3BQ9BZI7 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
UPF3BQ9BZI7 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
UPF3BQ9BZI7 AC108860.2-201ENST00000562760 2183 ntBASIC21.38■■□□□ 1.01
UPF3BQ9BZI7 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
UPF3BQ9BZI7 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC21.38■■□□□ 1.01
UPF3BQ9BZI7 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC21.38■■□□□ 1.01
UPF3BQ9BZI7 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
UPF3BQ9BZI7 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC21.38■■□□□ 1.01
UPF3BQ9BZI7 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC21.38■■□□□ 1.01
UPF3BQ9BZI7 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
UPF3BQ9BZI7 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
UPF3BQ9BZI7 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
UPF3BQ9BZI7 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
UPF3BQ9BZI7 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC21.38■■□□□ 1.01
UPF3BQ9BZI7 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC21.38■■□□□ 1.01
UPF3BQ9BZI7 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC21.38■■□□□ 1.01
UPF3BQ9BZI7 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
UPF3BQ9BZI7 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
UPF3BQ9BZI7 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC21.38■■□□□ 1.01
UPF3BQ9BZI7 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC21.38■■□□□ 1.01
UPF3BQ9BZI7 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
UPF3BQ9BZI7 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
UPF3BQ9BZI7 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
UPF3BQ9BZI7 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
UPF3BQ9BZI7 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC21.38■■□□□ 1.01
UPF3BQ9BZI7 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
UPF3BQ9BZI7 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
UPF3BQ9BZI7 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
UPF3BQ9BZI7 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
UPF3BQ9BZI7 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC21.38■■□□□ 1.01
UPF3BQ9BZI7 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC21.38■■□□□ 1.01
UPF3BQ9BZI7 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC21.38■■□□□ 1.01
UPF3BQ9BZI7 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
UPF3BQ9BZI7 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC21.37■■□□□ 1.01
UPF3BQ9BZI7 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UPF3BQ9BZI7 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC21.37■■□□□ 1.01
UPF3BQ9BZI7 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
UPF3BQ9BZI7 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
UPF3BQ9BZI7 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
UPF3BQ9BZI7 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UPF3BQ9BZI7 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC21.37■■□□□ 1.01
UPF3BQ9BZI7 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UPF3BQ9BZI7 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
UPF3BQ9BZI7 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UPF3BQ9BZI7 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UPF3BQ9BZI7 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
UPF3BQ9BZI7 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UPF3BQ9BZI7 LIN28AP1-201ENST00000429574 405 ntBASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms