Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
NOTCH4Q99466 MTDHP5-201ENST00000598980 586 ntBASIC18.37■□□□□ 0.53
NOTCH4Q99466 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.37■□□□□ 0.53
NOTCH4Q99466 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NOTCH4Q99466 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NOTCH4Q99466 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.37■□□□□ 0.53
NOTCH4Q99466 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.36■□□□□ 0.53
NOTCH4Q99466 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NOTCH4Q99466 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NOTCH4Q99466 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
NOTCH4Q99466 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NOTCH4Q99466 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NOTCH4Q99466 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.36■□□□□ 0.53
NOTCH4Q99466 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.36■□□□□ 0.53
NOTCH4Q99466 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.36■□□□□ 0.53
NOTCH4Q99466 AC109462.3-201ENST00000573934 613 ntBASIC18.36■□□□□ 0.53
NOTCH4Q99466 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.36■□□□□ 0.53
NOTCH4Q99466 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NOTCH4Q99466 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NOTCH4Q99466 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.36■□□□□ 0.53
NOTCH4Q99466 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NOTCH4Q99466 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NOTCH4Q99466 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NOTCH4Q99466 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NOTCH4Q99466 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NOTCH4Q99466 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
NOTCH4Q99466 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NOTCH4Q99466 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
NOTCH4Q99466 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.35■□□□□ 0.53
NOTCH4Q99466 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.35■□□□□ 0.53
NOTCH4Q99466 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
NOTCH4Q99466 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.35■□□□□ 0.53
NOTCH4Q99466 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.35■□□□□ 0.53
NOTCH4Q99466 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NOTCH4Q99466 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NOTCH4Q99466 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NOTCH4Q99466 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
NOTCH4Q99466 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NOTCH4Q99466 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.35■□□□□ 0.53
NOTCH4Q99466 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NOTCH4Q99466 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NOTCH4Q99466 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.35■□□□□ 0.53
NOTCH4Q99466 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NOTCH4Q99466 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.35■□□□□ 0.53
NOTCH4Q99466 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NOTCH4Q99466 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.35■□□□□ 0.53
NOTCH4Q99466 AL355385.1-201ENST00000606123 409 ntBASIC18.35■□□□□ 0.53
NOTCH4Q99466 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NOTCH4Q99466 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NOTCH4Q99466 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.34■□□□□ 0.53
NOTCH4Q99466 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.34■□□□□ 0.53
NOTCH4Q99466 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
NOTCH4Q99466 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NOTCH4Q99466 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NOTCH4Q99466 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NOTCH4Q99466 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
NOTCH4Q99466 AP006288.1-201ENST00000446065 395 ntBASIC18.34■□□□□ 0.53
NOTCH4Q99466 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.34■□□□□ 0.53
NOTCH4Q99466 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.34■□□□□ 0.53
NOTCH4Q99466 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.34■□□□□ 0.53
NOTCH4Q99466 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.34■□□□□ 0.53
NOTCH4Q99466 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.34■□□□□ 0.53
NOTCH4Q99466 AL589182.2-201ENST00000619332 1049 ntBASIC18.34■□□□□ 0.53
NOTCH4Q99466 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
NOTCH4Q99466 AC022898.2-201ENST00000616822 1312 ntBASIC18.34■□□□□ 0.53
NOTCH4Q99466 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NOTCH4Q99466 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NOTCH4Q99466 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
NOTCH4Q99466 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
NOTCH4Q99466 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NOTCH4Q99466 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
NOTCH4Q99466 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
NOTCH4Q99466 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NOTCH4Q99466 AL020989.1-201ENST00000422979 469 ntBASIC18.33■□□□□ 0.53
NOTCH4Q99466 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.33■□□□□ 0.53
NOTCH4Q99466 HTR5BP-201ENST00000430851 1154 ntBASIC18.33■□□□□ 0.53
NOTCH4Q99466 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.33■□□□□ 0.53
NOTCH4Q99466 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
NOTCH4Q99466 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.33■□□□□ 0.53
NOTCH4Q99466 AC008667.4-201ENST00000607370 168 ntBASIC18.33■□□□□ 0.53
NOTCH4Q99466 AC004706.3-202ENST00000621574 984 ntBASIC18.33■□□□□ 0.53
NOTCH4Q99466 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
NOTCH4Q99466 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.33■□□□□ 0.53
NOTCH4Q99466 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
NOTCH4Q99466 AC009949.1-201ENST00000623048 1830 ntBASIC18.33■□□□□ 0.53
NOTCH4Q99466 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
NOTCH4Q99466 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NOTCH4Q99466 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.33■□□□□ 0.53
NOTCH4Q99466 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.33■□□□□ 0.52
NOTCH4Q99466 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NOTCH4Q99466 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NOTCH4Q99466 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NOTCH4Q99466 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
NOTCH4Q99466 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NOTCH4Q99466 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.33■□□□□ 0.52
NOTCH4Q99466 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.33■□□□□ 0.52
NOTCH4Q99466 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.33■□□□□ 0.52
NOTCH4Q99466 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.33■□□□□ 0.52
NOTCH4Q99466 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
NOTCH4Q99466 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms