Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM47Q96LD4 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.95■□□□□ 0.94
TRIM47Q96LD4 LBH-204ENST00000406087 559 ntTSL 4 BASIC20.95■□□□□ 0.94
TRIM47Q96LD4 GPX1P2-201ENST00000429271 606 ntBASIC20.95■□□□□ 0.94
TRIM47Q96LD4 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM47Q96LD4 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM47Q96LD4 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM47Q96LD4 AC034105.1-201ENST00000563488 319 ntBASIC20.95■□□□□ 0.94
TRIM47Q96LD4 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.95■□□□□ 0.94
TRIM47Q96LD4 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.95■□□□□ 0.94
TRIM47Q96LD4 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC20.95■□□□□ 0.94
TRIM47Q96LD4 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM47Q96LD4 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM47Q96LD4 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM47Q96LD4 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM47Q96LD4 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
TRIM47Q96LD4 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM47Q96LD4 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM47Q96LD4 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
TRIM47Q96LD4 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
TRIM47Q96LD4 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
TRIM47Q96LD4 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM47Q96LD4 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM47Q96LD4 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.94■□□□□ 0.94
TRIM47Q96LD4 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM47Q96LD4 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
TRIM47Q96LD4 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM47Q96LD4 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM47Q96LD4 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
TRIM47Q96LD4 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC20.94■□□□□ 0.94
TRIM47Q96LD4 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.94■□□□□ 0.94
TRIM47Q96LD4 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM47Q96LD4 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.94■□□□□ 0.94
TRIM47Q96LD4 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
TRIM47Q96LD4 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.94■□□□□ 0.94
TRIM47Q96LD4 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.94■□□□□ 0.94
TRIM47Q96LD4 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM47Q96LD4 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.94■□□□□ 0.94
TRIM47Q96LD4 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
TRIM47Q96LD4 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.94■□□□□ 0.94
TRIM47Q96LD4 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.94■□□□□ 0.94
TRIM47Q96LD4 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM47Q96LD4 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.94■□□□□ 0.94
TRIM47Q96LD4 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM47Q96LD4 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
TRIM47Q96LD4 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM47Q96LD4 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM47Q96LD4 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM47Q96LD4 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM47Q96LD4 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.93■□□□□ 0.94
TRIM47Q96LD4 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM47Q96LD4 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.93■□□□□ 0.94
TRIM47Q96LD4 ANO7L1-203ENST00000602586 1720 ntBASIC20.93■□□□□ 0.94
TRIM47Q96LD4 AL357033.4-201ENST00000617703 1807 ntBASIC20.93■□□□□ 0.94
TRIM47Q96LD4 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM47Q96LD4 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM47Q96LD4 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM47Q96LD4 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM47Q96LD4 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM47Q96LD4 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.93■□□□□ 0.94
TRIM47Q96LD4 IMP4-203ENST00000409935 958 ntTSL 5 BASIC20.93■□□□□ 0.94
TRIM47Q96LD4 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.93■□□□□ 0.94
TRIM47Q96LD4 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.93■□□□□ 0.94
TRIM47Q96LD4 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.93■□□□□ 0.94
TRIM47Q96LD4 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM47Q96LD4 AC021087.4-201ENST00000563761 564 ntBASIC20.93■□□□□ 0.94
TRIM47Q96LD4 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC20.93■□□□□ 0.94
TRIM47Q96LD4 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.93■□□□□ 0.94
TRIM47Q96LD4 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC20.93■□□□□ 0.94
TRIM47Q96LD4 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC20.93■□□□□ 0.94
TRIM47Q96LD4 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
TRIM47Q96LD4 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM47Q96LD4 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC20.93■□□□□ 0.94
TRIM47Q96LD4 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM47Q96LD4 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM47Q96LD4 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM47Q96LD4 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM47Q96LD4 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM47Q96LD4 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM47Q96LD4 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM47Q96LD4 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM47Q96LD4 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM47Q96LD4 AC005082.1-201ENST00000413042 2259 ntBASIC20.92■□□□□ 0.94
TRIM47Q96LD4 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.92■□□□□ 0.94
TRIM47Q96LD4 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM47Q96LD4 RPS8P6-201ENST00000426177 609 ntBASIC20.92■□□□□ 0.94
TRIM47Q96LD4 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.92■□□□□ 0.94
TRIM47Q96LD4 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC20.92■□□□□ 0.94
TRIM47Q96LD4 URGCP-206ENST00000446958 365 ntTSL 2 BASIC20.92■□□□□ 0.94
TRIM47Q96LD4 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.92■□□□□ 0.94
TRIM47Q96LD4 AC112482.1-201ENST00000492080 688 ntBASIC20.92■□□□□ 0.94
TRIM47Q96LD4 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.92■□□□□ 0.94
TRIM47Q96LD4 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
TRIM47Q96LD4 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
TRIM47Q96LD4 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM47Q96LD4 KRT8P50-201ENST00000562022 1438 ntBASIC20.92■□□□□ 0.94
TRIM47Q96LD4 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM47Q96LD4 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM47Q96LD4 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
TRIM47Q96LD4 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms