Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.31■□□□□ 0.68
SNX27Q96L92 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.31■□□□□ 0.68
SNX27Q96L92 AF238378.1-201ENST00000526806 358 ntBASIC19.31■□□□□ 0.68
SNX27Q96L92 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.31■□□□□ 0.68
SNX27Q96L92 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.31■□□□□ 0.68
SNX27Q96L92 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.31■□□□□ 0.68
SNX27Q96L92 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.31■□□□□ 0.68
SNX27Q96L92 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.31■□□□□ 0.68
SNX27Q96L92 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.31■□□□□ 0.68
SNX27Q96L92 LETM1P2-201ENST00000597330 2178 ntBASIC19.31■□□□□ 0.68
SNX27Q96L92 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.31■□□□□ 0.68
SNX27Q96L92 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SNX27Q96L92 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.31■□□□□ 0.68
SNX27Q96L92 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.31■□□□□ 0.68
SNX27Q96L92 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNX27Q96L92 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.31■□□□□ 0.68
SNX27Q96L92 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNX27Q96L92 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNX27Q96L92 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC19.31■□□□□ 0.68
SNX27Q96L92 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNX27Q96L92 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNX27Q96L92 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNX27Q96L92 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.3■□□□□ 0.68
SNX27Q96L92 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.3■□□□□ 0.68
SNX27Q96L92 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
SNX27Q96L92 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNX27Q96L92 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNX27Q96L92 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNX27Q96L92 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNX27Q96L92 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
SNX27Q96L92 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SNX27Q96L92 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SNX27Q96L92 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.3■□□□□ 0.68
SNX27Q96L92 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNX27Q96L92 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SNX27Q96L92 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.3■□□□□ 0.68
SNX27Q96L92 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
SNX27Q96L92 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.3■□□□□ 0.68
SNX27Q96L92 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SNX27Q96L92 AL121912.1-201ENST00000603683 238 ntBASIC19.3■□□□□ 0.68
SNX27Q96L92 AL691403.2-201ENST00000618460 490 ntBASIC19.3■□□□□ 0.68
SNX27Q96L92 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNX27Q96L92 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.3■□□□□ 0.68
SNX27Q96L92 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.3■□□□□ 0.68
SNX27Q96L92 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SNX27Q96L92 AC010460.3-201ENST00000511359 1579 ntBASIC19.3■□□□□ 0.68
SNX27Q96L92 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNX27Q96L92 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNX27Q96L92 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
SNX27Q96L92 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNX27Q96L92 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
SNX27Q96L92 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SNX27Q96L92 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.3■□□□□ 0.68
SNX27Q96L92 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNX27Q96L92 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNX27Q96L92 AC100803.2-201ENST00000562459 1963 ntBASIC19.3■□□□□ 0.68
SNX27Q96L92 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SNX27Q96L92 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
SNX27Q96L92 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SNX27Q96L92 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNX27Q96L92 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SNX27Q96L92 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SNX27Q96L92 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNX27Q96L92 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.29■□□□□ 0.68
SNX27Q96L92 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNX27Q96L92 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNX27Q96L92 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
SNX27Q96L92 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNX27Q96L92 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SNX27Q96L92 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.29■□□□□ 0.68
SNX27Q96L92 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.29■□□□□ 0.68
SNX27Q96L92 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.29■□□□□ 0.68
SNX27Q96L92 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.29■□□□□ 0.68
SNX27Q96L92 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.29■□□□□ 0.68
SNX27Q96L92 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNX27Q96L92 AF228730.7-201ENST00000641842 219 ntBASIC19.29■□□□□ 0.68
SNX27Q96L92 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNX27Q96L92 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNX27Q96L92 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNX27Q96L92 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SNX27Q96L92 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNX27Q96L92 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.29■□□□□ 0.68
SNX27Q96L92 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.29■□□□□ 0.68
SNX27Q96L92 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
SNX27Q96L92 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SNX27Q96L92 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SNX27Q96L92 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNX27Q96L92 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNX27Q96L92 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SNX27Q96L92 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SNX27Q96L92 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SNX27Q96L92 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.28■□□□□ 0.68
SNX27Q96L92 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.28■□□□□ 0.68
SNX27Q96L92 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.28■□□□□ 0.68
SNX27Q96L92 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
SNX27Q96L92 AC005104.2-201ENST00000427818 678 ntBASIC19.28■□□□□ 0.68
SNX27Q96L92 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.28■□□□□ 0.68
SNX27Q96L92 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
SNX27Q96L92 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.28■□□□□ 0.68
SNX27Q96L92 AP001269.4-201ENST00000609611 512 ntBASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms