Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ALMS1Q8TCU4 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
ALMS1Q8TCU4 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC11.98□□□□□ -0.49
ALMS1Q8TCU4 GID4-202ENST00000376345 1391 ntTSL 3 BASIC11.98□□□□□ -0.49
ALMS1Q8TCU4 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ALMS1Q8TCU4 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ALMS1Q8TCU4 REM2-202ENST00000536884 1331 ntTSL 2 BASIC11.98□□□□□ -0.49
ALMS1Q8TCU4 GPS2P2-201ENST00000430745 888 ntBASIC11.98□□□□□ -0.49
ALMS1Q8TCU4 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC11.98□□□□□ -0.49
ALMS1Q8TCU4 AC023141.13-201ENST00000604991 943 ntBASIC11.98□□□□□ -0.49
ALMS1Q8TCU4 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ALMS1Q8TCU4 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC11.98□□□□□ -0.49
ALMS1Q8TCU4 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC11.98□□□□□ -0.49
ALMS1Q8TCU4 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
ALMS1Q8TCU4 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ALMS1Q8TCU4 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC11.98□□□□□ -0.49
ALMS1Q8TCU4 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ALMS1Q8TCU4 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC11.98□□□□□ -0.49
ALMS1Q8TCU4 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
ALMS1Q8TCU4 TIMM8BP1-201ENST00000452384 211 ntBASIC11.98□□□□□ -0.49
ALMS1Q8TCU4 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC11.98□□□□□ -0.49
ALMS1Q8TCU4 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC11.98□□□□□ -0.49
ALMS1Q8TCU4 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
ALMS1Q8TCU4 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ALMS1Q8TCU4 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ALMS1Q8TCU4 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC11.98□□□□□ -0.49
ALMS1Q8TCU4 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
ALMS1Q8TCU4 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ALMS1Q8TCU4 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ALMS1Q8TCU4 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ALMS1Q8TCU4 AC063926.2-201ENST00000623766 1308 ntBASIC11.98□□□□□ -0.49
ALMS1Q8TCU4 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ALMS1Q8TCU4 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ALMS1Q8TCU4 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ALMS1Q8TCU4 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ALMS1Q8TCU4 FAM86GP-201ENST00000448322 971 ntBASIC11.98□□□□□ -0.49
ALMS1Q8TCU4 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ALMS1Q8TCU4 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
ALMS1Q8TCU4 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC11.98□□□□□ -0.49
ALMS1Q8TCU4 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC11.98□□□□□ -0.49
ALMS1Q8TCU4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC11.98□□□□□ -0.49
ALMS1Q8TCU4 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC11.98□□□□□ -0.49
ALMS1Q8TCU4 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ALMS1Q8TCU4 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
ALMS1Q8TCU4 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
ALMS1Q8TCU4 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
ALMS1Q8TCU4 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
ALMS1Q8TCU4 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
ALMS1Q8TCU4 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
ALMS1Q8TCU4 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
ALMS1Q8TCU4 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ALMS1Q8TCU4 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
ALMS1Q8TCU4 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ALMS1Q8TCU4 GRAP-202ENST00000395635 834 ntTSL 2 BASIC11.97□□□□□ -0.49
ALMS1Q8TCU4 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC11.97□□□□□ -0.49
ALMS1Q8TCU4 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC11.97□□□□□ -0.49
ALMS1Q8TCU4 KRT18P32-201ENST00000424695 1287 ntBASIC11.97□□□□□ -0.49
ALMS1Q8TCU4 FAM207CP-201ENST00000443486 507 ntBASIC11.97□□□□□ -0.49
ALMS1Q8TCU4 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
ALMS1Q8TCU4 SERBP1P5-201ENST00000510079 1181 ntBASIC11.97□□□□□ -0.49
ALMS1Q8TCU4 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC11.97□□□□□ -0.49
ALMS1Q8TCU4 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC11.97□□□□□ -0.49
ALMS1Q8TCU4 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ALMS1Q8TCU4 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
ALMS1Q8TCU4 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ALMS1Q8TCU4 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
ALMS1Q8TCU4 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
ALMS1Q8TCU4 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ALMS1Q8TCU4 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC11.97□□□□□ -0.49
ALMS1Q8TCU4 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC11.97□□□□□ -0.49
ALMS1Q8TCU4 FUT8-AS1-201ENST00000621019 1521 ntBASIC11.97□□□□□ -0.49
ALMS1Q8TCU4 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
ALMS1Q8TCU4 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ALMS1Q8TCU4 AFG3L1P-217ENST00000557444 2447 ntBASIC11.97□□□□□ -0.49
ALMS1Q8TCU4 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ALMS1Q8TCU4 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ALMS1Q8TCU4 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
ALMS1Q8TCU4 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ALMS1Q8TCU4 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC11.97□□□□□ -0.49
ALMS1Q8TCU4 RAC2-204ENST00000406508 893 ntTSL 5 BASIC11.97□□□□□ -0.49
ALMS1Q8TCU4 AL627223.1-201ENST00000416693 442 ntBASIC11.97□□□□□ -0.49
ALMS1Q8TCU4 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ALMS1Q8TCU4 AL353135.1-201ENST00000606729 504 ntBASIC11.97□□□□□ -0.49
ALMS1Q8TCU4 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ALMS1Q8TCU4 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ALMS1Q8TCU4 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ALMS1Q8TCU4 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ALMS1Q8TCU4 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
ALMS1Q8TCU4 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC11.97□□□□□ -0.49
ALMS1Q8TCU4 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC11.97□□□□□ -0.49
ALMS1Q8TCU4 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC11.97□□□□□ -0.49
ALMS1Q8TCU4 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC11.97□□□□□ -0.49
ALMS1Q8TCU4 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ALMS1Q8TCU4 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
ALMS1Q8TCU4 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC11.97□□□□□ -0.49
ALMS1Q8TCU4 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ALMS1Q8TCU4 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
ALMS1Q8TCU4 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
ALMS1Q8TCU4 TUBB3P1-201ENST00000405796 1332 ntBASIC11.97□□□□□ -0.49
ALMS1Q8TCU4 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms