Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC89Q8N998 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CCDC89Q8N998 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC89Q8N998 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC89Q8N998 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC89Q8N998 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC89Q8N998 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CCDC89Q8N998 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC89Q8N998 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC89Q8N998 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC89Q8N998 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC89Q8N998 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC89Q8N998 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.63■□□□□ 0.57
CCDC89Q8N998 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.63■□□□□ 0.57
CCDC89Q8N998 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC89Q8N998 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC89Q8N998 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.63■□□□□ 0.57
CCDC89Q8N998 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC89Q8N998 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC89Q8N998 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC89Q8N998 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC89Q8N998 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC89Q8N998 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.63■□□□□ 0.57
CCDC89Q8N998 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC89Q8N998 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC89Q8N998 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC89Q8N998 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC89Q8N998 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC89Q8N998 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CCDC89Q8N998 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC89Q8N998 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CCDC89Q8N998 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC89Q8N998 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CCDC89Q8N998 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC89Q8N998 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC89Q8N998 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.63■□□□□ 0.57
CCDC89Q8N998 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC89Q8N998 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC89Q8N998 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC89Q8N998 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC89Q8N998 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC89Q8N998 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC89Q8N998 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC89Q8N998 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC89Q8N998 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
CCDC89Q8N998 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC89Q8N998 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC89Q8N998 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CCDC89Q8N998 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
CCDC89Q8N998 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC89Q8N998 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC89Q8N998 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC89Q8N998 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.62■□□□□ 0.57
CCDC89Q8N998 AL512604.3-201ENST00000569583 964 ntBASIC18.62■□□□□ 0.57
CCDC89Q8N998 AC024243.1-201ENST00000609234 778 ntBASIC18.62■□□□□ 0.57
CCDC89Q8N998 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC89Q8N998 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC89Q8N998 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC89Q8N998 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC89Q8N998 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.62■□□□□ 0.57
CCDC89Q8N998 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC89Q8N998 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC89Q8N998 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC89Q8N998 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC89Q8N998 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC89Q8N998 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CCDC89Q8N998 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CCDC89Q8N998 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC89Q8N998 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC89Q8N998 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC89Q8N998 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CCDC89Q8N998 AL023806.1-201ENST00000603994 1649 ntBASIC18.61■□□□□ 0.57
CCDC89Q8N998 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC89Q8N998 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC89Q8N998 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC89Q8N998 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC89Q8N998 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC89Q8N998 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC89Q8N998 INGX-201ENST00000359239 846 ntBASIC18.61■□□□□ 0.57
CCDC89Q8N998 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CCDC89Q8N998 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC89Q8N998 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC89Q8N998 AC009947.2-201ENST00000444014 672 ntBASIC18.61■□□□□ 0.57
CCDC89Q8N998 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.61■□□□□ 0.57
CCDC89Q8N998 NAPSB-206ENST00000562112 1266 ntBASIC18.61■□□□□ 0.57
CCDC89Q8N998 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC89Q8N998 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC89Q8N998 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
CCDC89Q8N998 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CCDC89Q8N998 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC89Q8N998 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC89Q8N998 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CCDC89Q8N998 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
CCDC89Q8N998 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC89Q8N998 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC89Q8N998 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC89Q8N998 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC89Q8N998 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CCDC89Q8N998 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC89Q8N998 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms