Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VRK2Q86Y07 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VRK2Q86Y07 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
VRK2Q86Y07 OR6D1P-202ENST00000641007 5290 ntBASIC16.6■□□□□ 0.25
VRK2Q86Y07 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
VRK2Q86Y07 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
VRK2Q86Y07 AL355312.1-201ENST00000407115 2176 ntBASIC16.6■□□□□ 0.25
VRK2Q86Y07 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VRK2Q86Y07 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.6■□□□□ 0.25
VRK2Q86Y07 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
VRK2Q86Y07 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.6■□□□□ 0.25
VRK2Q86Y07 PP12613-201ENST00000424958 2230 ntBASIC16.6■□□□□ 0.25
VRK2Q86Y07 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VRK2Q86Y07 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
VRK2Q86Y07 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
VRK2Q86Y07 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VRK2Q86Y07 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
VRK2Q86Y07 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
VRK2Q86Y07 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
VRK2Q86Y07 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.6■□□□□ 0.25
VRK2Q86Y07 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.6■□□□□ 0.25
VRK2Q86Y07 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.6■□□□□ 0.25
VRK2Q86Y07 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
VRK2Q86Y07 AC024563.2-201ENST00000603282 481 ntBASIC16.6■□□□□ 0.25
VRK2Q86Y07 AC012306.2-201ENST00000609350 630 ntBASIC16.6■□□□□ 0.25
VRK2Q86Y07 AC005363.2-201ENST00000618631 242 ntBASIC16.6■□□□□ 0.25
VRK2Q86Y07 AC073912.3-201ENST00000624414 853 ntBASIC16.6■□□□□ 0.25
VRK2Q86Y07 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VRK2Q86Y07 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VRK2Q86Y07 AL391807.1-203ENST00000604392 2365 ntBASIC16.6■□□□□ 0.25
VRK2Q86Y07 AC022898.2-201ENST00000616822 1312 ntBASIC16.6■□□□□ 0.25
VRK2Q86Y07 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.6■□□□□ 0.25
VRK2Q86Y07 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VRK2Q86Y07 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.6■□□□□ 0.25
VRK2Q86Y07 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
VRK2Q86Y07 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
VRK2Q86Y07 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
VRK2Q86Y07 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.6■□□□□ 0.25
VRK2Q86Y07 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.6■□□□□ 0.25
VRK2Q86Y07 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
VRK2Q86Y07 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VRK2Q86Y07 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
VRK2Q86Y07 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.6■□□□□ 0.25
VRK2Q86Y07 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VRK2Q86Y07 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
VRK2Q86Y07 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.59■□□□□ 0.25
VRK2Q86Y07 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VRK2Q86Y07 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
VRK2Q86Y07 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VRK2Q86Y07 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VRK2Q86Y07 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.59■□□□□ 0.25
VRK2Q86Y07 SPDYE15P-201ENST00000424157 909 ntBASIC16.59■□□□□ 0.25
VRK2Q86Y07 AL137013.1-201ENST00000432946 1228 ntBASIC16.59■□□□□ 0.25
VRK2Q86Y07 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VRK2Q86Y07 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
VRK2Q86Y07 AL136038.4-201ENST00000603606 1261 ntBASIC16.59■□□□□ 0.25
VRK2Q86Y07 AC139887.4-201ENST00000607877 719 ntBASIC16.59■□□□□ 0.25
VRK2Q86Y07 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
VRK2Q86Y07 AC011558.1-201ENST00000623459 338 ntBASIC16.59■□□□□ 0.25
VRK2Q86Y07 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
VRK2Q86Y07 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.59■□□□□ 0.25
VRK2Q86Y07 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VRK2Q86Y07 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
VRK2Q86Y07 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VRK2Q86Y07 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
VRK2Q86Y07 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VRK2Q86Y07 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.59■□□□□ 0.25
VRK2Q86Y07 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.59■□□□□ 0.25
VRK2Q86Y07 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
VRK2Q86Y07 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VRK2Q86Y07 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.59■□□□□ 0.25
VRK2Q86Y07 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VRK2Q86Y07 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.59■□□□□ 0.25
VRK2Q86Y07 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
VRK2Q86Y07 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
VRK2Q86Y07 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.58■□□□□ 0.25
VRK2Q86Y07 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
VRK2Q86Y07 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.25
VRK2Q86Y07 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.25
VRK2Q86Y07 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
VRK2Q86Y07 AC139713.2-201ENST00000641328 2723 ntBASIC16.58■□□□□ 0.25
VRK2Q86Y07 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
VRK2Q86Y07 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
VRK2Q86Y07 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.58■□□□□ 0.25
VRK2Q86Y07 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
VRK2Q86Y07 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.24
VRK2Q86Y07 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
VRK2Q86Y07 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VRK2Q86Y07 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VRK2Q86Y07 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VRK2Q86Y07 TERF1P1-201ENST00000311003 1181 ntBASIC16.58■□□□□ 0.24
VRK2Q86Y07 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
VRK2Q86Y07 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VRK2Q86Y07 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
VRK2Q86Y07 AC113347.1-201ENST00000413321 391 ntBASIC16.58■□□□□ 0.24
VRK2Q86Y07 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.58■□□□□ 0.24
VRK2Q86Y07 AC113404.2-201ENST00000507884 177 ntBASIC16.58■□□□□ 0.24
VRK2Q86Y07 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.58■□□□□ 0.24
VRK2Q86Y07 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.58■□□□□ 0.24
VRK2Q86Y07 AL031432.5-201ENST00000641059 760 ntBASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms