Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH12P55289 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
CDH12P55289 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.74■□□□□ 0.27
CDH12P55289 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH12P55289 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CDH12P55289 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.74■□□□□ 0.27
CDH12P55289 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH12P55289 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH12P55289 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDH12P55289 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.74■□□□□ 0.27
CDH12P55289 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.74■□□□□ 0.27
CDH12P55289 TSPY15P-201ENST00000457163 923 ntBASIC16.74■□□□□ 0.27
CDH12P55289 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDH12P55289 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDH12P55289 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CDH12P55289 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.74■□□□□ 0.27
CDH12P55289 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH12P55289 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH12P55289 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.74■□□□□ 0.27
CDH12P55289 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH12P55289 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDH12P55289 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH12P55289 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDH12P55289 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH12P55289 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH12P55289 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.74■□□□□ 0.27
CDH12P55289 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CDH12P55289 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH12P55289 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CDH12P55289 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDH12P55289 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH12P55289 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH12P55289 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH12P55289 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH12P55289 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH12P55289 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.73■□□□□ 0.27
CDH12P55289 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CDH12P55289 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDH12P55289 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CDH12P55289 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CDH12P55289 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH12P55289 TSPY14P-201ENST00000303979 915 ntBASIC16.73■□□□□ 0.27
CDH12P55289 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDH12P55289 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.73■□□□□ 0.27
CDH12P55289 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.73■□□□□ 0.27
CDH12P55289 MIR4497-201ENST00000583208 89 ntBASIC16.73■□□□□ 0.27
CDH12P55289 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDH12P55289 AC010653.2-201ENST00000623505 997 ntBASIC16.73■□□□□ 0.27
CDH12P55289 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.73■□□□□ 0.27
CDH12P55289 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH12P55289 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDH12P55289 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDH12P55289 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CDH12P55289 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDH12P55289 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH12P55289 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH12P55289 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
CDH12P55289 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.73■□□□□ 0.27
CDH12P55289 AL023806.1-201ENST00000603994 1649 ntBASIC16.73■□□□□ 0.27
CDH12P55289 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CDH12P55289 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CDH12P55289 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH12P55289 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH12P55289 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDH12P55289 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDH12P55289 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH12P55289 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH12P55289 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CDH12P55289 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.72■□□□□ 0.27
CDH12P55289 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH12P55289 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH12P55289 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.72■□□□□ 0.27
CDH12P55289 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH12P55289 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH12P55289 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH12P55289 INGX-201ENST00000359239 846 ntBASIC16.72■□□□□ 0.27
CDH12P55289 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CDH12P55289 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDH12P55289 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.72■□□□□ 0.27
CDH12P55289 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH12P55289 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.72■□□□□ 0.27
CDH12P55289 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDH12P55289 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH12P55289 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDH12P55289 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.72■□□□□ 0.27
CDH12P55289 AC112497.1-201ENST00000624824 639 ntBASIC16.72■□□□□ 0.27
CDH12P55289 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH12P55289 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH12P55289 AL355312.1-201ENST00000407115 2176 ntBASIC16.72■□□□□ 0.27
CDH12P55289 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH12P55289 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH12P55289 CYP2D8P-201ENST00000433633 1490 ntBASIC16.72■□□□□ 0.27
CDH12P55289 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CDH12P55289 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.72■□□□□ 0.27
CDH12P55289 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDH12P55289 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
CDH12P55289 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.72■□□□□ 0.27
CDH12P55289 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH12P55289 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDH12P55289 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms