Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.09■□□□□ 0.49
XPAP23025 AC022898.2-201ENST00000616822 1312 ntBASIC18.09■□□□□ 0.49
XPAP23025 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
XPAP23025 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
XPAP23025 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
XPAP23025 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
XPAP23025 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
XPAP23025 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
XPAP23025 NUS1P1-201ENST00000446295 882 ntBASIC18.09■□□□□ 0.49
XPAP23025 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.09■□□□□ 0.49
XPAP23025 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.09■□□□□ 0.49
XPAP23025 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.09■□□□□ 0.49
XPAP23025 KRT126P-201ENST00000549467 1181 ntBASIC18.09■□□□□ 0.49
XPAP23025 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
XPAP23025 AC138894.3-201ENST00000603787 634 ntBASIC18.09■□□□□ 0.49
XPAP23025 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.09■□□□□ 0.49
XPAP23025 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
XPAP23025 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
XPAP23025 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
XPAP23025 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
XPAP23025 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
XPAP23025 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
XPAP23025 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.09■□□□□ 0.49
XPAP23025 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
XPAP23025 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.09■□□□□ 0.49
XPAP23025 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
XPAP23025 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
XPAP23025 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
XPAP23025 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
XPAP23025 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.08■□□□□ 0.49
XPAP23025 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.08■□□□□ 0.49
XPAP23025 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
XPAP23025 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
XPAP23025 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
XPAP23025 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
XPAP23025 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
XPAP23025 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.08■□□□□ 0.48
XPAP23025 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
XPAP23025 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
XPAP23025 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
XPAP23025 DUSP5P1-201ENST00000441325 1139 ntBASIC18.08■□□□□ 0.48
XPAP23025 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.08■□□□□ 0.48
XPAP23025 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.08■□□□□ 0.48
XPAP23025 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
XPAP23025 AL121772.3-201ENST00000610840 674 ntBASIC18.08■□□□□ 0.48
XPAP23025 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
XPAP23025 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
XPAP23025 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.08■□□□□ 0.48
XPAP23025 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.08■□□□□ 0.48
XPAP23025 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
XPAP23025 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
XPAP23025 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
XPAP23025 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
XPAP23025 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
XPAP23025 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
XPAP23025 AC093010.1-201ENST00000473625 1624 ntBASIC18.08■□□□□ 0.48
XPAP23025 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.08■□□□□ 0.48
XPAP23025 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
XPAP23025 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
XPAP23025 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
XPAP23025 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.07■□□□□ 0.48
XPAP23025 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
XPAP23025 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
XPAP23025 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.07■□□□□ 0.48
XPAP23025 AL450487.1-201ENST00000426799 995 ntBASIC18.07■□□□□ 0.48
XPAP23025 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
XPAP23025 FOSL1P1-201ENST00000511041 816 ntBASIC18.07■□□□□ 0.48
XPAP23025 AL691432.3-201ENST00000621860 400 ntBASIC18.07■□□□□ 0.48
XPAP23025 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
XPAP23025 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.07■□□□□ 0.48
XPAP23025 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
XPAP23025 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
XPAP23025 NSUN5P1-202ENST00000421140 1535 ntBASIC18.07■□□□□ 0.48
XPAP23025 NSUN5P2-203ENST00000457352 1529 ntBASIC18.07■□□□□ 0.48
XPAP23025 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
XPAP23025 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
XPAP23025 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
XPAP23025 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
XPAP23025 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
XPAP23025 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.07■□□□□ 0.48
XPAP23025 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
XPAP23025 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.07■□□□□ 0.48
XPAP23025 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
XPAP23025 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
XPAP23025 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.06■□□□□ 0.48
XPAP23025 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.06■□□□□ 0.48
XPAP23025 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
XPAP23025 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
XPAP23025 AL096828.2-201ENST00000567259 1965 ntBASIC18.06■□□□□ 0.48
XPAP23025 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
XPAP23025 AC135776.1-201ENST00000319817 2481 ntBASIC18.06■□□□□ 0.48
XPAP23025 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
XPAP23025 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
XPAP23025 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.06■□□□□ 0.48
XPAP23025 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.06■□□□□ 0.48
XPAP23025 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.06■□□□□ 0.48
XPAP23025 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
XPAP23025 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
XPAP23025 AC112698.1-201ENST00000510299 916 ntBASIC18.06■□□□□ 0.48
XPAP23025 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms