Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav8-1A0A075B641 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Trav8-1A0A075B641 Gm8784-201ENSMUST00000222096 1435 ntBASIC10.8□□□□□ -0.68
Trav8-1A0A075B641 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav8-1A0A075B641 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav8-1A0A075B641 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav8-1A0A075B641 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav8-1A0A075B641 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav8-1A0A075B641 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav8-1A0A075B641 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Trav8-1A0A075B641 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav8-1A0A075B641 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav8-1A0A075B641 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav8-1A0A075B641 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav8-1A0A075B641 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav8-1A0A075B641 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Trav8-1A0A075B641 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Trav8-1A0A075B641 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Trav8-1A0A075B641 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav8-1A0A075B641 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav8-1A0A075B641 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Trav8-1A0A075B641 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav8-1A0A075B641 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav8-1A0A075B641 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC10.79□□□□□ -0.68
Trav8-1A0A075B641 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav8-1A0A075B641 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav8-1A0A075B641 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav8-1A0A075B641 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC10.79□□□□□ -0.68
Trav8-1A0A075B641 Timm23-208ENSMUST00000226683 750 ntBASIC10.79□□□□□ -0.68
Trav8-1A0A075B641 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav8-1A0A075B641 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Trav8-1A0A075B641 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav8-1A0A075B641 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav8-1A0A075B641 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav8-1A0A075B641 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav8-1A0A075B641 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav8-1A0A075B641 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav8-1A0A075B641 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Trav8-1A0A075B641 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
Trav8-1A0A075B641 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav8-1A0A075B641 Gm43205-201ENSMUST00000198622 1968 ntBASIC10.79□□□□□ -0.68
Trav8-1A0A075B641 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC10.79□□□□□ -0.68
Trav8-1A0A075B641 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav8-1A0A075B641 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav8-1A0A075B641 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav8-1A0A075B641 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav8-1A0A075B641 Rubie-203ENSMUST00000227803 2430 ntBASIC10.78□□□□□ -0.68
Trav8-1A0A075B641 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Trav8-1A0A075B641 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Trav8-1A0A075B641 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav8-1A0A075B641 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Trav8-1A0A075B641 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Trav8-1A0A075B641 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav8-1A0A075B641 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Trav8-1A0A075B641 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Trav8-1A0A075B641 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav8-1A0A075B641 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav8-1A0A075B641 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav8-1A0A075B641 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC10.78□□□□□ -0.68
Trav8-1A0A075B641 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Trav8-1A0A075B641 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav8-1A0A075B641 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav8-1A0A075B641 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav8-1A0A075B641 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Trav8-1A0A075B641 Gm18115-201ENSMUST00000221209 621 ntBASIC10.78□□□□□ -0.68
Trav8-1A0A075B641 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Trav8-1A0A075B641 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Trav8-1A0A075B641 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav8-1A0A075B641 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Trav8-1A0A075B641 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav8-1A0A075B641 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav8-1A0A075B641 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav8-1A0A075B641 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Trav8-1A0A075B641 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Trav8-1A0A075B641 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC10.78□□□□□ -0.68
Trav8-1A0A075B641 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Trav8-1A0A075B641 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav8-1A0A075B641 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav8-1A0A075B641 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC10.78□□□□□ -0.68
Trav8-1A0A075B641 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav8-1A0A075B641 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav8-1A0A075B641 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Trav8-1A0A075B641 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav8-1A0A075B641 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav8-1A0A075B641 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Trav8-1A0A075B641 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav8-1A0A075B641 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC10.77□□□□□ -0.68
Trav8-1A0A075B641 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav8-1A0A075B641 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav8-1A0A075B641 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Trav8-1A0A075B641 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav8-1A0A075B641 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC10.77□□□□□ -0.68
Trav8-1A0A075B641 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav8-1A0A075B641 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav8-1A0A075B641 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav8-1A0A075B641 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav8-1A0A075B641 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav8-1A0A075B641 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav8-1A0A075B641 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav8-1A0A075B641 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms