Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.7■□□□□ 0.58
YIPF1Q9Y548 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.7■□□□□ 0.58
YIPF1Q9Y548 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
YIPF1Q9Y548 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.7■□□□□ 0.58
YIPF1Q9Y548 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
YIPF1Q9Y548 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
YIPF1Q9Y548 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
YIPF1Q9Y548 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
YIPF1Q9Y548 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
YIPF1Q9Y548 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.7■□□□□ 0.58
YIPF1Q9Y548 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
YIPF1Q9Y548 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
YIPF1Q9Y548 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
YIPF1Q9Y548 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
YIPF1Q9Y548 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
YIPF1Q9Y548 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.69■□□□□ 0.58
YIPF1Q9Y548 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
YIPF1Q9Y548 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
YIPF1Q9Y548 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
YIPF1Q9Y548 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
YIPF1Q9Y548 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.69■□□□□ 0.58
YIPF1Q9Y548 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
YIPF1Q9Y548 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.69■□□□□ 0.58
YIPF1Q9Y548 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
YIPF1Q9Y548 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.69■□□□□ 0.58
YIPF1Q9Y548 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
YIPF1Q9Y548 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
YIPF1Q9Y548 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
YIPF1Q9Y548 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
YIPF1Q9Y548 BX005266.1-201ENST00000473402 457 ntBASIC18.69■□□□□ 0.58
YIPF1Q9Y548 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
YIPF1Q9Y548 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
YIPF1Q9Y548 AC012640.2-201ENST00000561606 901 ntBASIC18.69■□□□□ 0.58
YIPF1Q9Y548 MTDHP4-201ENST00000600287 670 ntBASIC18.69■□□□□ 0.58
YIPF1Q9Y548 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
YIPF1Q9Y548 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
YIPF1Q9Y548 HLA-J-201ENST00000462773 1622 ntBASIC18.69■□□□□ 0.58
YIPF1Q9Y548 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
YIPF1Q9Y548 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
YIPF1Q9Y548 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
YIPF1Q9Y548 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
YIPF1Q9Y548 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
YIPF1Q9Y548 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
YIPF1Q9Y548 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.69■□□□□ 0.58
YIPF1Q9Y548 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
YIPF1Q9Y548 AC093677.2-201ENST00000600169 1863 ntBASIC18.69■□□□□ 0.58
YIPF1Q9Y548 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
YIPF1Q9Y548 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.69■□□□□ 0.58
YIPF1Q9Y548 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
YIPF1Q9Y548 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
YIPF1Q9Y548 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
YIPF1Q9Y548 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.69■□□□□ 0.58
YIPF1Q9Y548 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
YIPF1Q9Y548 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
YIPF1Q9Y548 AC018445.3-201ENST00000624177 1945 ntBASIC18.68■□□□□ 0.58
YIPF1Q9Y548 PMPCAP1-201ENST00000508114 1576 ntBASIC18.68■□□□□ 0.58
YIPF1Q9Y548 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
YIPF1Q9Y548 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
YIPF1Q9Y548 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.68■□□□□ 0.58
YIPF1Q9Y548 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.68■□□□□ 0.58
YIPF1Q9Y548 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.68■□□□□ 0.58
YIPF1Q9Y548 AC079776.2-201ENST00000641154 1609 ntBASIC18.68■□□□□ 0.58
YIPF1Q9Y548 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
YIPF1Q9Y548 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
YIPF1Q9Y548 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
YIPF1Q9Y548 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.68■□□□□ 0.58
YIPF1Q9Y548 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.68■□□□□ 0.58
YIPF1Q9Y548 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.68■□□□□ 0.58
YIPF1Q9Y548 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
YIPF1Q9Y548 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
YIPF1Q9Y548 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
YIPF1Q9Y548 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
YIPF1Q9Y548 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
YIPF1Q9Y548 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.68■□□□□ 0.58
YIPF1Q9Y548 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
YIPF1Q9Y548 BX323043.1-201ENST00000641006 1765 ntBASIC18.68■□□□□ 0.58
YIPF1Q9Y548 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
YIPF1Q9Y548 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
YIPF1Q9Y548 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
YIPF1Q9Y548 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.67■□□□□ 0.58
YIPF1Q9Y548 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
YIPF1Q9Y548 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.67■□□□□ 0.58
YIPF1Q9Y548 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
YIPF1Q9Y548 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.67■□□□□ 0.58
YIPF1Q9Y548 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
YIPF1Q9Y548 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
YIPF1Q9Y548 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
YIPF1Q9Y548 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
YIPF1Q9Y548 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
YIPF1Q9Y548 AC098831.1-202ENST00000438821 336 ntBASIC18.67■□□□□ 0.58
YIPF1Q9Y548 AC092910.1-201ENST00000482027 1129 ntBASIC18.67■□□□□ 0.58
YIPF1Q9Y548 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.67■□□□□ 0.58
YIPF1Q9Y548 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
YIPF1Q9Y548 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.67■□□□□ 0.58
YIPF1Q9Y548 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.67■□□□□ 0.58
YIPF1Q9Y548 AD001527.2-201ENST00000622994 785 ntBASIC18.67■□□□□ 0.58
YIPF1Q9Y548 AC008735.5-201ENST00000623544 497 ntBASIC18.67■□□□□ 0.58
YIPF1Q9Y548 AC107918.4-202ENST00000641623 219 ntBASIC18.67■□□□□ 0.58
YIPF1Q9Y548 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.67■□□□□ 0.58
YIPF1Q9Y548 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms