Protein–RNA interactions for Protein: Q9UBT3

DKK4, Dickkopf-related protein 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK4Q9UBT3 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
DKK4Q9UBT3 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
DKK4Q9UBT3 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.63■□□□□ 0.25
DKK4Q9UBT3 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.63■□□□□ 0.25
DKK4Q9UBT3 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.63■□□□□ 0.25
DKK4Q9UBT3 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.63■□□□□ 0.25
DKK4Q9UBT3 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.63■□□□□ 0.25
DKK4Q9UBT3 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.63■□□□□ 0.25
DKK4Q9UBT3 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
DKK4Q9UBT3 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.63■□□□□ 0.25
DKK4Q9UBT3 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.63■□□□□ 0.25
DKK4Q9UBT3 AL390955.2-201ENST00000603032 514 ntBASIC16.63■□□□□ 0.25
DKK4Q9UBT3 AC023141.13-201ENST00000604991 943 ntBASIC16.63■□□□□ 0.25
DKK4Q9UBT3 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.63■□□□□ 0.25
DKK4Q9UBT3 GGTLC5P-201ENST00000617623 998 ntBASIC16.63■□□□□ 0.25
DKK4Q9UBT3 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DKK4Q9UBT3 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.63■□□□□ 0.25
DKK4Q9UBT3 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
DKK4Q9UBT3 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
DKK4Q9UBT3 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
DKK4Q9UBT3 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DKK4Q9UBT3 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
DKK4Q9UBT3 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.63■□□□□ 0.25
DKK4Q9UBT3 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
DKK4Q9UBT3 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.63■□□□□ 0.25
DKK4Q9UBT3 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC16.63■□□□□ 0.25
DKK4Q9UBT3 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC16.63■□□□□ 0.25
DKK4Q9UBT3 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.62■□□□□ 0.25
DKK4Q9UBT3 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
DKK4Q9UBT3 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.62■□□□□ 0.25
DKK4Q9UBT3 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DKK4Q9UBT3 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
DKK4Q9UBT3 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DKK4Q9UBT3 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DKK4Q9UBT3 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DKK4Q9UBT3 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
DKK4Q9UBT3 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
DKK4Q9UBT3 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
DKK4Q9UBT3 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DKK4Q9UBT3 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
DKK4Q9UBT3 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DKK4Q9UBT3 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DKK4Q9UBT3 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DKK4Q9UBT3 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
DKK4Q9UBT3 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.62■□□□□ 0.25
DKK4Q9UBT3 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.62■□□□□ 0.25
DKK4Q9UBT3 INGX-202ENST00000489074 768 ntBASIC16.62■□□□□ 0.25
DKK4Q9UBT3 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.62■□□□□ 0.25
DKK4Q9UBT3 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.62■□□□□ 0.25
DKK4Q9UBT3 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DKK4Q9UBT3 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DKK4Q9UBT3 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
DKK4Q9UBT3 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.62■□□□□ 0.25
DKK4Q9UBT3 AC025580.3-201ENST00000617932 1424 ntBASIC16.62■□□□□ 0.25
DKK4Q9UBT3 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.61■□□□□ 0.25
DKK4Q9UBT3 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.61■□□□□ 0.25
DKK4Q9UBT3 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
DKK4Q9UBT3 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.61■□□□□ 0.25
DKK4Q9UBT3 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
DKK4Q9UBT3 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
DKK4Q9UBT3 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
DKK4Q9UBT3 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
DKK4Q9UBT3 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.61■□□□□ 0.25
DKK4Q9UBT3 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
DKK4Q9UBT3 LINC01126-201ENST00000623515 1646 ntBASIC16.61■□□□□ 0.25
DKK4Q9UBT3 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.61■□□□□ 0.25
DKK4Q9UBT3 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.61■□□□□ 0.25
DKK4Q9UBT3 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.61■□□□□ 0.25
DKK4Q9UBT3 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.61■□□□□ 0.25
DKK4Q9UBT3 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.61■□□□□ 0.25
DKK4Q9UBT3 AC093520.2-201ENST00000561830 333 ntBASIC16.61■□□□□ 0.25
DKK4Q9UBT3 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.61■□□□□ 0.25
DKK4Q9UBT3 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.61■□□□□ 0.25
DKK4Q9UBT3 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.61■□□□□ 0.25
DKK4Q9UBT3 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.61■□□□□ 0.25
DKK4Q9UBT3 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
DKK4Q9UBT3 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.61■□□□□ 0.25
DKK4Q9UBT3 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
DKK4Q9UBT3 AC093484.2-201ENST00000580996 2166 ntBASIC16.61■□□□□ 0.25
DKK4Q9UBT3 AL032819.2-201ENST00000624543 2162 ntBASIC16.61■□□□□ 0.25
DKK4Q9UBT3 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
DKK4Q9UBT3 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
DKK4Q9UBT3 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
DKK4Q9UBT3 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.6■□□□□ 0.25
DKK4Q9UBT3 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
DKK4Q9UBT3 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
DKK4Q9UBT3 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
DKK4Q9UBT3 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DKK4Q9UBT3 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DKK4Q9UBT3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DKK4Q9UBT3 AC073130.3-201ENST00000624389 2278 ntBASIC16.6■□□□□ 0.25
DKK4Q9UBT3 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
DKK4Q9UBT3 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
DKK4Q9UBT3 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.6■□□□□ 0.25
DKK4Q9UBT3 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
DKK4Q9UBT3 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DKK4Q9UBT3 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.6■□□□□ 0.25
DKK4Q9UBT3 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.6■□□□□ 0.25
DKK4Q9UBT3 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.6■□□□□ 0.25
DKK4Q9UBT3 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms