Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VRK1Q99986 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
VRK1Q99986 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VRK1Q99986 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VRK1Q99986 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC15.89■□□□□ 0.13
VRK1Q99986 AL109659.2-201ENST00000606809 1674 ntBASIC15.89■□□□□ 0.13
VRK1Q99986 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VRK1Q99986 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
VRK1Q99986 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.88■□□□□ 0.13
VRK1Q99986 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.88■□□□□ 0.13
VRK1Q99986 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VRK1Q99986 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VRK1Q99986 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
VRK1Q99986 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VRK1Q99986 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
VRK1Q99986 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC15.88■□□□□ 0.13
VRK1Q99986 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.88■□□□□ 0.13
VRK1Q99986 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC15.88■□□□□ 0.13
VRK1Q99986 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VRK1Q99986 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
VRK1Q99986 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VRK1Q99986 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VRK1Q99986 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VRK1Q99986 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VRK1Q99986 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VRK1Q99986 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VRK1Q99986 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
VRK1Q99986 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VRK1Q99986 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.88■□□□□ 0.13
VRK1Q99986 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.88■□□□□ 0.13
VRK1Q99986 KRT18P23-201ENST00000435622 1283 ntBASIC15.88■□□□□ 0.13
VRK1Q99986 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VRK1Q99986 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VRK1Q99986 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.88■□□□□ 0.13
VRK1Q99986 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VRK1Q99986 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VRK1Q99986 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.88■□□□□ 0.13
VRK1Q99986 AL136038.3-201ENST00000561909 1096 ntBASIC15.88■□□□□ 0.13
VRK1Q99986 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC15.88■□□□□ 0.13
VRK1Q99986 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.88■□□□□ 0.13
VRK1Q99986 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
VRK1Q99986 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VRK1Q99986 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VRK1Q99986 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
VRK1Q99986 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VRK1Q99986 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC15.88■□□□□ 0.13
VRK1Q99986 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VRK1Q99986 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VRK1Q99986 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC15.88■□□□□ 0.13
VRK1Q99986 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
VRK1Q99986 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
VRK1Q99986 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VRK1Q99986 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC15.87■□□□□ 0.13
VRK1Q99986 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC15.87■□□□□ 0.13
VRK1Q99986 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
VRK1Q99986 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VRK1Q99986 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC15.87■□□□□ 0.13
VRK1Q99986 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.87■□□□□ 0.13
VRK1Q99986 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC15.87■□□□□ 0.13
VRK1Q99986 AC092597.1-201ENST00000487352 616 ntBASIC15.87■□□□□ 0.13
VRK1Q99986 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VRK1Q99986 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC15.87■□□□□ 0.13
VRK1Q99986 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC15.87■□□□□ 0.13
VRK1Q99986 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC15.87■□□□□ 0.13
VRK1Q99986 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VRK1Q99986 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
VRK1Q99986 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VRK1Q99986 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
VRK1Q99986 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
VRK1Q99986 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
VRK1Q99986 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VRK1Q99986 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
VRK1Q99986 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VRK1Q99986 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
VRK1Q99986 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VRK1Q99986 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
VRK1Q99986 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VRK1Q99986 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC15.87■□□□□ 0.13
VRK1Q99986 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VRK1Q99986 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VRK1Q99986 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
VRK1Q99986 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
VRK1Q99986 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC15.87■□□□□ 0.13
VRK1Q99986 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC15.86■□□□□ 0.13
VRK1Q99986 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VRK1Q99986 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VRK1Q99986 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VRK1Q99986 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VRK1Q99986 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VRK1Q99986 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
VRK1Q99986 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC15.86■□□□□ 0.13
VRK1Q99986 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VRK1Q99986 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
VRK1Q99986 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VRK1Q99986 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
VRK1Q99986 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VRK1Q99986 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
VRK1Q99986 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.86■□□□□ 0.13
VRK1Q99986 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
VRK1Q99986 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms