Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.45■□□□□ 0.22
CNIH3Q8TBE1 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CNIH3Q8TBE1 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNIH3Q8TBE1 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNIH3Q8TBE1 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNIH3Q8TBE1 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNIH3Q8TBE1 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNIH3Q8TBE1 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.45■□□□□ 0.22
CNIH3Q8TBE1 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNIH3Q8TBE1 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CNIH3Q8TBE1 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
CNIH3Q8TBE1 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CNIH3Q8TBE1 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.45■□□□□ 0.22
CNIH3Q8TBE1 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CNIH3Q8TBE1 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CNIH3Q8TBE1 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNIH3Q8TBE1 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.45■□□□□ 0.22
CNIH3Q8TBE1 LINC01126-201ENST00000623515 1646 ntBASIC16.45■□□□□ 0.22
CNIH3Q8TBE1 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CNIH3Q8TBE1 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNIH3Q8TBE1 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.44■□□□□ 0.22
CNIH3Q8TBE1 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.44■□□□□ 0.22
CNIH3Q8TBE1 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CNIH3Q8TBE1 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNIH3Q8TBE1 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNIH3Q8TBE1 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CNIH3Q8TBE1 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CNIH3Q8TBE1 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CNIH3Q8TBE1 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNIH3Q8TBE1 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CNIH3Q8TBE1 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.44■□□□□ 0.22
CNIH3Q8TBE1 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CNIH3Q8TBE1 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC16.44■□□□□ 0.22
CNIH3Q8TBE1 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.44■□□□□ 0.22
CNIH3Q8TBE1 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNIH3Q8TBE1 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.44■□□□□ 0.22
CNIH3Q8TBE1 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNIH3Q8TBE1 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNIH3Q8TBE1 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.44■□□□□ 0.22
CNIH3Q8TBE1 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.44■□□□□ 0.22
CNIH3Q8TBE1 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNIH3Q8TBE1 AL163051.1-201ENST00000569214 1512 ntBASIC16.44■□□□□ 0.22
CNIH3Q8TBE1 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNIH3Q8TBE1 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNIH3Q8TBE1 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNIH3Q8TBE1 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNIH3Q8TBE1 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CNIH3Q8TBE1 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.43■□□□□ 0.22
CNIH3Q8TBE1 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.43■□□□□ 0.22
CNIH3Q8TBE1 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.43■□□□□ 0.22
CNIH3Q8TBE1 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.43■□□□□ 0.22
CNIH3Q8TBE1 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.43■□□□□ 0.22
CNIH3Q8TBE1 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNIH3Q8TBE1 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNIH3Q8TBE1 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNIH3Q8TBE1 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNIH3Q8TBE1 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
CNIH3Q8TBE1 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC16.43■□□□□ 0.22
CNIH3Q8TBE1 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC16.43■□□□□ 0.22
CNIH3Q8TBE1 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC16.43■□□□□ 0.22
CNIH3Q8TBE1 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CNIH3Q8TBE1 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.43■□□□□ 0.22
CNIH3Q8TBE1 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC16.43■□□□□ 0.22
CNIH3Q8TBE1 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CNIH3Q8TBE1 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.43■□□□□ 0.22
CNIH3Q8TBE1 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.43■□□□□ 0.22
CNIH3Q8TBE1 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.43■□□□□ 0.22
CNIH3Q8TBE1 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNIH3Q8TBE1 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNIH3Q8TBE1 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CNIH3Q8TBE1 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CNIH3Q8TBE1 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.43■□□□□ 0.22
CNIH3Q8TBE1 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.43■□□□□ 0.22
CNIH3Q8TBE1 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
CNIH3Q8TBE1 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.43■□□□□ 0.22
CNIH3Q8TBE1 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNIH3Q8TBE1 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CNIH3Q8TBE1 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CNIH3Q8TBE1 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CNIH3Q8TBE1 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CNIH3Q8TBE1 AC008741.2-201ENST00000612792 3115 ntBASIC16.43■□□□□ 0.22
CNIH3Q8TBE1 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
CNIH3Q8TBE1 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNIH3Q8TBE1 AL162727.3-201ENST00000635661 2787 ntBASIC16.43■□□□□ 0.22
CNIH3Q8TBE1 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CNIH3Q8TBE1 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CNIH3Q8TBE1 AC011270.2-201ENST00000624293 2550 ntBASIC16.42■□□□□ 0.22
CNIH3Q8TBE1 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNIH3Q8TBE1 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.42■□□□□ 0.22
CNIH3Q8TBE1 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CNIH3Q8TBE1 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.42■□□□□ 0.22
CNIH3Q8TBE1 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.42■□□□□ 0.22
CNIH3Q8TBE1 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.42■□□□□ 0.22
CNIH3Q8TBE1 DOC2GP-204ENST00000639052 2548 ntBASIC16.42■□□□□ 0.22
CNIH3Q8TBE1 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.42■□□□□ 0.22
CNIH3Q8TBE1 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNIH3Q8TBE1 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNIH3Q8TBE1 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNIH3Q8TBE1 MIR149-201ENST00000384879 89 ntBASIC16.42■□□□□ 0.22
CNIH3Q8TBE1 AL023284.2-201ENST00000405850 579 ntBASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms