Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PTCHD4Q6ZW05 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
PTCHD4Q6ZW05 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTCHD4Q6ZW05 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTCHD4Q6ZW05 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
PTCHD4Q6ZW05 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PTCHD4Q6ZW05 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.56■□□□□ 0.24
PTCHD4Q6ZW05 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTCHD4Q6ZW05 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PTCHD4Q6ZW05 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.56■□□□□ 0.24
PTCHD4Q6ZW05 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
PTCHD4Q6ZW05 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.56■□□□□ 0.24
PTCHD4Q6ZW05 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PTCHD4Q6ZW05 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.56■□□□□ 0.24
PTCHD4Q6ZW05 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTCHD4Q6ZW05 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTCHD4Q6ZW05 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.56■□□□□ 0.24
PTCHD4Q6ZW05 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PTCHD4Q6ZW05 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTCHD4Q6ZW05 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTCHD4Q6ZW05 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.56■□□□□ 0.24
PTCHD4Q6ZW05 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PTCHD4Q6ZW05 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.56■□□□□ 0.24
PTCHD4Q6ZW05 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTCHD4Q6ZW05 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTCHD4Q6ZW05 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
PTCHD4Q6ZW05 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PTCHD4Q6ZW05 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
PTCHD4Q6ZW05 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTCHD4Q6ZW05 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTCHD4Q6ZW05 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.56■□□□□ 0.24
PTCHD4Q6ZW05 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTCHD4Q6ZW05 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
PTCHD4Q6ZW05 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PTCHD4Q6ZW05 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTCHD4Q6ZW05 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PTCHD4Q6ZW05 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
PTCHD4Q6ZW05 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTCHD4Q6ZW05 KRT8P50-201ENST00000562022 1438 ntBASIC16.55■□□□□ 0.24
PTCHD4Q6ZW05 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.55■□□□□ 0.24
PTCHD4Q6ZW05 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.55■□□□□ 0.24
PTCHD4Q6ZW05 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.55■□□□□ 0.24
PTCHD4Q6ZW05 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PTCHD4Q6ZW05 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.55■□□□□ 0.24
PTCHD4Q6ZW05 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
PTCHD4Q6ZW05 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PTCHD4Q6ZW05 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.55■□□□□ 0.24
PTCHD4Q6ZW05 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTCHD4Q6ZW05 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.55■□□□□ 0.24
PTCHD4Q6ZW05 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.55■□□□□ 0.24
PTCHD4Q6ZW05 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.55■□□□□ 0.24
PTCHD4Q6ZW05 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTCHD4Q6ZW05 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTCHD4Q6ZW05 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTCHD4Q6ZW05 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTCHD4Q6ZW05 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTCHD4Q6ZW05 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTCHD4Q6ZW05 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTCHD4Q6ZW05 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTCHD4Q6ZW05 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.55■□□□□ 0.24
PTCHD4Q6ZW05 AC034236.2-201ENST00000606662 1610 ntBASIC16.55■□□□□ 0.24
PTCHD4Q6ZW05 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTCHD4Q6ZW05 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.55■□□□□ 0.24
PTCHD4Q6ZW05 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTCHD4Q6ZW05 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PTCHD4Q6ZW05 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.55■□□□□ 0.24
PTCHD4Q6ZW05 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PTCHD4Q6ZW05 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PTCHD4Q6ZW05 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTCHD4Q6ZW05 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTCHD4Q6ZW05 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTCHD4Q6ZW05 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PTCHD4Q6ZW05 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PTCHD4Q6ZW05 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PTCHD4Q6ZW05 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTCHD4Q6ZW05 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTCHD4Q6ZW05 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
PTCHD4Q6ZW05 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PTCHD4Q6ZW05 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTCHD4Q6ZW05 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.54■□□□□ 0.24
PTCHD4Q6ZW05 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PTCHD4Q6ZW05 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTCHD4Q6ZW05 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTCHD4Q6ZW05 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTCHD4Q6ZW05 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.54■□□□□ 0.24
PTCHD4Q6ZW05 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PTCHD4Q6ZW05 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTCHD4Q6ZW05 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
PTCHD4Q6ZW05 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTCHD4Q6ZW05 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PTCHD4Q6ZW05 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTCHD4Q6ZW05 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTCHD4Q6ZW05 CRYGFP-201ENST00000418459 633 ntBASIC16.54■□□□□ 0.24
PTCHD4Q6ZW05 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTCHD4Q6ZW05 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.54■□□□□ 0.24
PTCHD4Q6ZW05 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTCHD4Q6ZW05 MIR4674-201ENST00000582457 87 ntBASIC16.54■□□□□ 0.24
PTCHD4Q6ZW05 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.54■□□□□ 0.24
PTCHD4Q6ZW05 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PTCHD4Q6ZW05 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms