Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
TCRBV3S1A0A5B6 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
TCRBV3S1A0A5B6 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV3S1A0A5B6 KRT16P1-201ENST00000399124 1418 ntBASIC16.84■□□□□ 0.29
TCRBV3S1A0A5B6 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV3S1A0A5B6 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV3S1A0A5B6 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.84■□□□□ 0.29
TCRBV3S1A0A5B6 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.84■□□□□ 0.29
TCRBV3S1A0A5B6 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV3S1A0A5B6 OR6D1P-202ENST00000641007 5290 ntBASIC16.84■□□□□ 0.29
TCRBV3S1A0A5B6 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TCRBV3S1A0A5B6 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.84■□□□□ 0.29
TCRBV3S1A0A5B6 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV3S1A0A5B6 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.84■□□□□ 0.29
TCRBV3S1A0A5B6 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV3S1A0A5B6 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.84■□□□□ 0.29
TCRBV3S1A0A5B6 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV3S1A0A5B6 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV3S1A0A5B6 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV3S1A0A5B6 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TCRBV3S1A0A5B6 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TCRBV3S1A0A5B6 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
TCRBV3S1A0A5B6 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
TCRBV3S1A0A5B6 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TCRBV3S1A0A5B6 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.29
TCRBV3S1A0A5B6 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
TCRBV3S1A0A5B6 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TCRBV3S1A0A5B6 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TCRBV3S1A0A5B6 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TCRBV3S1A0A5B6 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TCRBV3S1A0A5B6 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TCRBV3S1A0A5B6 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TCRBV3S1A0A5B6 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TCRBV3S1A0A5B6 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TCRBV3S1A0A5B6 KRT17P3-201ENST00000420566 1262 ntBASIC16.83■□□□□ 0.28
TCRBV3S1A0A5B6 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.83■□□□□ 0.28
TCRBV3S1A0A5B6 AC069152.1-201ENST00000438030 544 ntBASIC16.83■□□□□ 0.28
TCRBV3S1A0A5B6 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.83■□□□□ 0.28
TCRBV3S1A0A5B6 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TCRBV3S1A0A5B6 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.83■□□□□ 0.28
TCRBV3S1A0A5B6 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
TCRBV3S1A0A5B6 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.83■□□□□ 0.28
TCRBV3S1A0A5B6 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TCRBV3S1A0A5B6 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC16.83■□□□□ 0.28
TCRBV3S1A0A5B6 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TCRBV3S1A0A5B6 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.83■□□□□ 0.28
TCRBV3S1A0A5B6 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC16.83■□□□□ 0.28
TCRBV3S1A0A5B6 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.83■□□□□ 0.28
TCRBV3S1A0A5B6 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.83■□□□□ 0.28
TCRBV3S1A0A5B6 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.83■□□□□ 0.28
TCRBV3S1A0A5B6 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TCRBV3S1A0A5B6 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TCRBV3S1A0A5B6 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TCRBV3S1A0A5B6 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TCRBV3S1A0A5B6 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TCRBV3S1A0A5B6 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TCRBV3S1A0A5B6 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.83■□□□□ 0.28
TCRBV3S1A0A5B6 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TCRBV3S1A0A5B6 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TCRBV3S1A0A5B6 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TCRBV3S1A0A5B6 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TCRBV3S1A0A5B6 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TCRBV3S1A0A5B6 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TCRBV3S1A0A5B6 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TCRBV3S1A0A5B6 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TCRBV3S1A0A5B6 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.82■□□□□ 0.28
TCRBV3S1A0A5B6 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.82■□□□□ 0.28
TCRBV3S1A0A5B6 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TCRBV3S1A0A5B6 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TCRBV3S1A0A5B6 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TCRBV3S1A0A5B6 KRT8P7-201ENST00000533003 1432 ntBASIC16.82■□□□□ 0.28
TCRBV3S1A0A5B6 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TCRBV3S1A0A5B6 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
TCRBV3S1A0A5B6 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TCRBV3S1A0A5B6 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC16.82■□□□□ 0.28
TCRBV3S1A0A5B6 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC16.82■□□□□ 0.28
TCRBV3S1A0A5B6 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TCRBV3S1A0A5B6 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.82■□□□□ 0.28
TCRBV3S1A0A5B6 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TCRBV3S1A0A5B6 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TCRBV3S1A0A5B6 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TCRBV3S1A0A5B6 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TCRBV3S1A0A5B6 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TCRBV3S1A0A5B6 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TCRBV3S1A0A5B6 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TCRBV3S1A0A5B6 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.82■□□□□ 0.28
TCRBV3S1A0A5B6 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TCRBV3S1A0A5B6 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.82■□□□□ 0.28
TCRBV3S1A0A5B6 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
TCRBV3S1A0A5B6 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TCRBV3S1A0A5B6 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TCRBV3S1A0A5B6 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.81■□□□□ 0.28
TCRBV3S1A0A5B6 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TCRBV3S1A0A5B6 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TCRBV3S1A0A5B6 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.81■□□□□ 0.28
TCRBV3S1A0A5B6 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TCRBV3S1A0A5B6 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TCRBV3S1A0A5B6 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TCRBV3S1A0A5B6 MAP2K4P1-201ENST00000438453 1195 ntBASIC16.81■□□□□ 0.28
TCRBV3S1A0A5B6 AC133681.1-201ENST00000465482 601 ntBASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms