Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV5A0A0B4J249 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV5A0A0B4J249 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC14□□□□□ -0.17
TRAV5A0A0B4J249 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
TRAV5A0A0B4J249 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC13.99□□□□□ -0.17
TRAV5A0A0B4J249 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
TRAV5A0A0B4J249 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV5A0A0B4J249 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV5A0A0B4J249 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC13.99□□□□□ -0.17
TRAV5A0A0B4J249 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV5A0A0B4J249 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV5A0A0B4J249 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV5A0A0B4J249 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV5A0A0B4J249 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV5A0A0B4J249 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV5A0A0B4J249 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV5A0A0B4J249 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
TRAV5A0A0B4J249 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV5A0A0B4J249 SAPCD2P4-201ENST00000424595 1171 ntBASIC13.99□□□□□ -0.17
TRAV5A0A0B4J249 KRT18P23-201ENST00000435622 1283 ntBASIC13.99□□□□□ -0.17
TRAV5A0A0B4J249 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV5A0A0B4J249 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC13.99□□□□□ -0.17
TRAV5A0A0B4J249 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV5A0A0B4J249 EMC9-206ENST00000560403 872 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAV5A0A0B4J249 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC13.99□□□□□ -0.17
TRAV5A0A0B4J249 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
TRAV5A0A0B4J249 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
TRAV5A0A0B4J249 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
TRAV5A0A0B4J249 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAV5A0A0B4J249 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC13.99□□□□□ -0.17
TRAV5A0A0B4J249 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC13.99□□□□□ -0.17
TRAV5A0A0B4J249 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV5A0A0B4J249 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC13.99□□□□□ -0.17
TRAV5A0A0B4J249 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAV5A0A0B4J249 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC13.99□□□□□ -0.17
TRAV5A0A0B4J249 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAV5A0A0B4J249 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
TRAV5A0A0B4J249 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV5A0A0B4J249 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV5A0A0B4J249 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAV5A0A0B4J249 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV5A0A0B4J249 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV5A0A0B4J249 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV5A0A0B4J249 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAV5A0A0B4J249 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV5A0A0B4J249 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC13.98□□□□□ -0.17
TRAV5A0A0B4J249 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TRAV5A0A0B4J249 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV5A0A0B4J249 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV5A0A0B4J249 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV5A0A0B4J249 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV5A0A0B4J249 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV5A0A0B4J249 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV5A0A0B4J249 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV5A0A0B4J249 AC100803.2-201ENST00000562459 1963 ntBASIC13.98□□□□□ -0.17
TRAV5A0A0B4J249 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC13.98□□□□□ -0.17
TRAV5A0A0B4J249 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV5A0A0B4J249 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAV5A0A0B4J249 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV5A0A0B4J249 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAV5A0A0B4J249 BOC-212ENST00000485230 2173 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAV5A0A0B4J249 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAV5A0A0B4J249 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV5A0A0B4J249 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV5A0A0B4J249 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
TRAV5A0A0B4J249 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV5A0A0B4J249 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC13.98□□□□□ -0.17
TRAV5A0A0B4J249 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC13.98□□□□□ -0.17
TRAV5A0A0B4J249 RNF121-214ENST00000533380 870 ntTSL 3 BASIC13.98□□□□□ -0.17
TRAV5A0A0B4J249 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAV5A0A0B4J249 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
TRAV5A0A0B4J249 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
TRAV5A0A0B4J249 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV5A0A0B4J249 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV5A0A0B4J249 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC13.98□□□□□ -0.17
TRAV5A0A0B4J249 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV5A0A0B4J249 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV5A0A0B4J249 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAV5A0A0B4J249 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV5A0A0B4J249 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAV5A0A0B4J249 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
TRAV5A0A0B4J249 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TRAV5A0A0B4J249 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAV5A0A0B4J249 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV5A0A0B4J249 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
TRAV5A0A0B4J249 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV5A0A0B4J249 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV5A0A0B4J249 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
TRAV5A0A0B4J249 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV5A0A0B4J249 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC13.97□□□□□ -0.17
TRAV5A0A0B4J249 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV5A0A0B4J249 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV5A0A0B4J249 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV5A0A0B4J249 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV5A0A0B4J249 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
TRAV5A0A0B4J249 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV5A0A0B4J249 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
TRAV5A0A0B4J249 CROCCP2-202ENST00000412962 2773 ntBASIC13.97□□□□□ -0.17
TRAV5A0A0B4J249 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
TRAV5A0A0B4J249 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms