Protein–RNA interactions for Protein: Q9Y6Q1

CAPN6, Calpain-6, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN6Q9Y6Q1 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPN6Q9Y6Q1 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPN6Q9Y6Q1 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPN6Q9Y6Q1 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPN6Q9Y6Q1 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN6Q9Y6Q1 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN6Q9Y6Q1 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
CAPN6Q9Y6Q1 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN6Q9Y6Q1 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN6Q9Y6Q1 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.06■□□□□ 0.64
CAPN6Q9Y6Q1 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
CAPN6Q9Y6Q1 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN6Q9Y6Q1 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN6Q9Y6Q1 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN6Q9Y6Q1 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN6Q9Y6Q1 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN6Q9Y6Q1 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN6Q9Y6Q1 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN6Q9Y6Q1 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN6Q9Y6Q1 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN6Q9Y6Q1 PRORSD1P-201ENST00000295112 541 ntBASIC19.06■□□□□ 0.64
CAPN6Q9Y6Q1 AC012618.2-201ENST00000428058 849 ntBASIC19.06■□□□□ 0.64
CAPN6Q9Y6Q1 AC098590.1-201ENST00000468126 897 ntBASIC19.06■□□□□ 0.64
CAPN6Q9Y6Q1 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.06■□□□□ 0.64
CAPN6Q9Y6Q1 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.06■□□□□ 0.64
CAPN6Q9Y6Q1 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.06■□□□□ 0.64
CAPN6Q9Y6Q1 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.06■□□□□ 0.64
CAPN6Q9Y6Q1 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.06■□□□□ 0.64
CAPN6Q9Y6Q1 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.06■□□□□ 0.64
CAPN6Q9Y6Q1 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CAPN6Q9Y6Q1 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
CAPN6Q9Y6Q1 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN6Q9Y6Q1 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN6Q9Y6Q1 LINC00167-201ENST00000530583 1419 ntBASIC19.06■□□□□ 0.64
CAPN6Q9Y6Q1 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN6Q9Y6Q1 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN6Q9Y6Q1 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC19.06■□□□□ 0.64
CAPN6Q9Y6Q1 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN6Q9Y6Q1 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CAPN6Q9Y6Q1 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CAPN6Q9Y6Q1 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CAPN6Q9Y6Q1 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CAPN6Q9Y6Q1 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CAPN6Q9Y6Q1 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.05■□□□□ 0.64
CAPN6Q9Y6Q1 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CAPN6Q9Y6Q1 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CAPN6Q9Y6Q1 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
CAPN6Q9Y6Q1 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.05■□□□□ 0.64
CAPN6Q9Y6Q1 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
CAPN6Q9Y6Q1 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CAPN6Q9Y6Q1 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CAPN6Q9Y6Q1 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CAPN6Q9Y6Q1 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.05■□□□□ 0.64
CAPN6Q9Y6Q1 TSPY17P-201ENST00000450329 467 ntBASIC19.05■□□□□ 0.64
CAPN6Q9Y6Q1 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CAPN6Q9Y6Q1 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.05■□□□□ 0.64
CAPN6Q9Y6Q1 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.05■□□□□ 0.64
CAPN6Q9Y6Q1 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CAPN6Q9Y6Q1 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CAPN6Q9Y6Q1 AC026471.5-201ENST00000615068 467 ntBASIC19.05■□□□□ 0.64
CAPN6Q9Y6Q1 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.05■□□□□ 0.64
CAPN6Q9Y6Q1 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CAPN6Q9Y6Q1 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.05■□□□□ 0.64
CAPN6Q9Y6Q1 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.05■□□□□ 0.64
CAPN6Q9Y6Q1 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CAPN6Q9Y6Q1 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.05■□□□□ 0.64
CAPN6Q9Y6Q1 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CAPN6Q9Y6Q1 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CAPN6Q9Y6Q1 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CAPN6Q9Y6Q1 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CAPN6Q9Y6Q1 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CAPN6Q9Y6Q1 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.05■□□□□ 0.64
CAPN6Q9Y6Q1 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
CAPN6Q9Y6Q1 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CAPN6Q9Y6Q1 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CAPN6Q9Y6Q1 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.05■□□□□ 0.64
CAPN6Q9Y6Q1 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CAPN6Q9Y6Q1 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CAPN6Q9Y6Q1 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CAPN6Q9Y6Q1 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CAPN6Q9Y6Q1 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
CAPN6Q9Y6Q1 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CAPN6Q9Y6Q1 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.04■□□□□ 0.64
CAPN6Q9Y6Q1 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.04■□□□□ 0.64
CAPN6Q9Y6Q1 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CAPN6Q9Y6Q1 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CAPN6Q9Y6Q1 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CAPN6Q9Y6Q1 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CAPN6Q9Y6Q1 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
CAPN6Q9Y6Q1 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.04■□□□□ 0.64
CAPN6Q9Y6Q1 AL355355.2-201ENST00000442321 338 ntBASIC19.04■□□□□ 0.64
CAPN6Q9Y6Q1 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CAPN6Q9Y6Q1 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CAPN6Q9Y6Q1 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CAPN6Q9Y6Q1 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CAPN6Q9Y6Q1 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CAPN6Q9Y6Q1 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.04■□□□□ 0.64
CAPN6Q9Y6Q1 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CAPN6Q9Y6Q1 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CAPN6Q9Y6Q1 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms