Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HPF1Q9NWY4 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.26
HPF1Q9NWY4 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
HPF1Q9NWY4 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HPF1Q9NWY4 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HPF1Q9NWY4 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HPF1Q9NWY4 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.7■□□□□ 0.26
HPF1Q9NWY4 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
HPF1Q9NWY4 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HPF1Q9NWY4 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
HPF1Q9NWY4 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HPF1Q9NWY4 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HPF1Q9NWY4 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HPF1Q9NWY4 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HPF1Q9NWY4 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HPF1Q9NWY4 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HPF1Q9NWY4 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.7■□□□□ 0.26
HPF1Q9NWY4 TSPY12P-201ENST00000421279 868 ntBASIC16.7■□□□□ 0.26
HPF1Q9NWY4 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.7■□□□□ 0.26
HPF1Q9NWY4 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HPF1Q9NWY4 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.7■□□□□ 0.26
HPF1Q9NWY4 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.7■□□□□ 0.26
HPF1Q9NWY4 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.7■□□□□ 0.26
HPF1Q9NWY4 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HPF1Q9NWY4 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.7■□□□□ 0.26
HPF1Q9NWY4 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.7■□□□□ 0.26
HPF1Q9NWY4 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HPF1Q9NWY4 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.7■□□□□ 0.26
HPF1Q9NWY4 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HPF1Q9NWY4 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.7■□□□□ 0.26
HPF1Q9NWY4 AL133373.2-201ENST00000623187 2828 ntBASIC16.7■□□□□ 0.26
HPF1Q9NWY4 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HPF1Q9NWY4 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HPF1Q9NWY4 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.7■□□□□ 0.26
HPF1Q9NWY4 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HPF1Q9NWY4 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
HPF1Q9NWY4 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
HPF1Q9NWY4 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HPF1Q9NWY4 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
HPF1Q9NWY4 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
HPF1Q9NWY4 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HPF1Q9NWY4 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HPF1Q9NWY4 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
HPF1Q9NWY4 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HPF1Q9NWY4 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HPF1Q9NWY4 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.69■□□□□ 0.26
HPF1Q9NWY4 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HPF1Q9NWY4 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.69■□□□□ 0.26
HPF1Q9NWY4 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HPF1Q9NWY4 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
HPF1Q9NWY4 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HPF1Q9NWY4 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HPF1Q9NWY4 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HPF1Q9NWY4 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.69■□□□□ 0.26
HPF1Q9NWY4 KRT126P-201ENST00000549467 1181 ntBASIC16.69■□□□□ 0.26
HPF1Q9NWY4 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HPF1Q9NWY4 Z69720.1-201ENST00000601483 472 ntBASIC16.69■□□□□ 0.26
HPF1Q9NWY4 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.69■□□□□ 0.26
HPF1Q9NWY4 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.69■□□□□ 0.26
HPF1Q9NWY4 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.69■□□□□ 0.26
HPF1Q9NWY4 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HPF1Q9NWY4 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HPF1Q9NWY4 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
HPF1Q9NWY4 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HPF1Q9NWY4 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HPF1Q9NWY4 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.69■□□□□ 0.26
HPF1Q9NWY4 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HPF1Q9NWY4 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.68■□□□□ 0.26
HPF1Q9NWY4 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HPF1Q9NWY4 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
HPF1Q9NWY4 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HPF1Q9NWY4 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HPF1Q9NWY4 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HPF1Q9NWY4 LINC01126-201ENST00000623515 1646 ntBASIC16.68■□□□□ 0.26
HPF1Q9NWY4 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.68■□□□□ 0.26
HPF1Q9NWY4 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
HPF1Q9NWY4 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HPF1Q9NWY4 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.68■□□□□ 0.26
HPF1Q9NWY4 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.68■□□□□ 0.26
HPF1Q9NWY4 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.68■□□□□ 0.26
HPF1Q9NWY4 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
HPF1Q9NWY4 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.68■□□□□ 0.26
HPF1Q9NWY4 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HPF1Q9NWY4 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.68■□□□□ 0.26
HPF1Q9NWY4 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HPF1Q9NWY4 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.68■□□□□ 0.26
HPF1Q9NWY4 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.68■□□□□ 0.26
HPF1Q9NWY4 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
HPF1Q9NWY4 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HPF1Q9NWY4 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HPF1Q9NWY4 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HPF1Q9NWY4 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HPF1Q9NWY4 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
HPF1Q9NWY4 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HPF1Q9NWY4 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HPF1Q9NWY4 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
HPF1Q9NWY4 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HPF1Q9NWY4 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
HPF1Q9NWY4 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.68■□□□□ 0.26
HPF1Q9NWY4 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms