Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CDC42SE2Q9NRR3 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CDC42SE2Q9NRR3 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CDC42SE2Q9NRR3 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
CDC42SE2Q9NRR3 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC12.41□□□□□ -0.42
CDC42SE2Q9NRR3 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CDC42SE2Q9NRR3 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CDC42SE2Q9NRR3 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CDC42SE2Q9NRR3 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CDC42SE2Q9NRR3 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CDC42SE2Q9NRR3 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CDC42SE2Q9NRR3 PHB2-202ENST00000440277 996 ntTSL 5 BASIC12.41□□□□□ -0.42
CDC42SE2Q9NRR3 FAM201B-201ENST00000458407 597 ntBASIC12.41□□□□□ -0.42
CDC42SE2Q9NRR3 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CDC42SE2Q9NRR3 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC12.41□□□□□ -0.42
CDC42SE2Q9NRR3 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC12.41□□□□□ -0.42
CDC42SE2Q9NRR3 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC12.41□□□□□ -0.42
CDC42SE2Q9NRR3 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC12.41□□□□□ -0.42
CDC42SE2Q9NRR3 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC12.41□□□□□ -0.42
CDC42SE2Q9NRR3 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC12.41□□□□□ -0.42
CDC42SE2Q9NRR3 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CDC42SE2Q9NRR3 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CDC42SE2Q9NRR3 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CDC42SE2Q9NRR3 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CDC42SE2Q9NRR3 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CDC42SE2Q9NRR3 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CDC42SE2Q9NRR3 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CDC42SE2Q9NRR3 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CDC42SE2Q9NRR3 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC12.41□□□□□ -0.42
CDC42SE2Q9NRR3 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
CDC42SE2Q9NRR3 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CDC42SE2Q9NRR3 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CDC42SE2Q9NRR3 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC12.41□□□□□ -0.42
CDC42SE2Q9NRR3 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
CDC42SE2Q9NRR3 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC12.41□□□□□ -0.42
CDC42SE2Q9NRR3 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CDC42SE2Q9NRR3 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CDC42SE2Q9NRR3 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CDC42SE2Q9NRR3 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CDC42SE2Q9NRR3 AC022898.2-201ENST00000616822 1312 ntBASIC12.4□□□□□ -0.42
CDC42SE2Q9NRR3 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CDC42SE2Q9NRR3 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CDC42SE2Q9NRR3 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CDC42SE2Q9NRR3 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CDC42SE2Q9NRR3 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CDC42SE2Q9NRR3 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CDC42SE2Q9NRR3 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC12.4□□□□□ -0.42
CDC42SE2Q9NRR3 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC12.4□□□□□ -0.42
CDC42SE2Q9NRR3 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CDC42SE2Q9NRR3 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CDC42SE2Q9NRR3 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CDC42SE2Q9NRR3 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC12.4□□□□□ -0.42
CDC42SE2Q9NRR3 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
CDC42SE2Q9NRR3 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC12.4□□□□□ -0.42
CDC42SE2Q9NRR3 KRT18P29-201ENST00000397031 1267 ntBASIC12.4□□□□□ -0.42
CDC42SE2Q9NRR3 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC12.4□□□□□ -0.42
CDC42SE2Q9NRR3 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CDC42SE2Q9NRR3 AC012618.2-201ENST00000428058 849 ntBASIC12.4□□□□□ -0.42
CDC42SE2Q9NRR3 GRAMD4P1-201ENST00000435181 1110 ntBASIC12.4□□□□□ -0.42
CDC42SE2Q9NRR3 CCR12P-201ENST00000446203 998 ntBASIC12.4□□□□□ -0.42
CDC42SE2Q9NRR3 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC12.4□□□□□ -0.42
CDC42SE2Q9NRR3 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC12.4□□□□□ -0.42
CDC42SE2Q9NRR3 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC12.4□□□□□ -0.42
CDC42SE2Q9NRR3 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC12.4□□□□□ -0.42
CDC42SE2Q9NRR3 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
CDC42SE2Q9NRR3 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC12.4□□□□□ -0.42
CDC42SE2Q9NRR3 ITM2C-210ENST00000620962 501 ntBASIC12.4□□□□□ -0.42
CDC42SE2Q9NRR3 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CDC42SE2Q9NRR3 AC113410.3-201ENST00000623366 203 ntBASIC12.4□□□□□ -0.42
CDC42SE2Q9NRR3 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CDC42SE2Q9NRR3 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CDC42SE2Q9NRR3 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CDC42SE2Q9NRR3 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC12.4□□□□□ -0.42
CDC42SE2Q9NRR3 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC12.4□□□□□ -0.42
CDC42SE2Q9NRR3 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
CDC42SE2Q9NRR3 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CDC42SE2Q9NRR3 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC12.4□□□□□ -0.42
CDC42SE2Q9NRR3 AD000864.1-201ENST00000624076 2295 ntBASIC12.4□□□□□ -0.42
CDC42SE2Q9NRR3 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CDC42SE2Q9NRR3 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CDC42SE2Q9NRR3 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
CDC42SE2Q9NRR3 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
CDC42SE2Q9NRR3 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
CDC42SE2Q9NRR3 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
CDC42SE2Q9NRR3 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC12.4□□□□□ -0.43
CDC42SE2Q9NRR3 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC12.39□□□□□ -0.43
CDC42SE2Q9NRR3 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC12.39□□□□□ -0.43
CDC42SE2Q9NRR3 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
CDC42SE2Q9NRR3 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CDC42SE2Q9NRR3 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
CDC42SE2Q9NRR3 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CDC42SE2Q9NRR3 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CDC42SE2Q9NRR3 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CDC42SE2Q9NRR3 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CDC42SE2Q9NRR3 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CDC42SE2Q9NRR3 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CDC42SE2Q9NRR3 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
CDC42SE2Q9NRR3 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC12.39□□□□□ -0.43
CDC42SE2Q9NRR3 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
CDC42SE2Q9NRR3 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms