Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.4■□□□□ 0.86
SYNGAP1Q96PV0 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.4■□□□□ 0.86
SYNGAP1Q96PV0 AC145285.3-201ENST00000564603 959 ntBASIC20.4■□□□□ 0.86
SYNGAP1Q96PV0 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.4■□□□□ 0.86
SYNGAP1Q96PV0 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SYNGAP1Q96PV0 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.4■□□□□ 0.86
SYNGAP1Q96PV0 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SYNGAP1Q96PV0 TERC-201ENST00000602385 541 ntBASIC20.4■□□□□ 0.86
SYNGAP1Q96PV0 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
SYNGAP1Q96PV0 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SYNGAP1Q96PV0 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SYNGAP1Q96PV0 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.4■□□□□ 0.86
SYNGAP1Q96PV0 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SYNGAP1Q96PV0 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SYNGAP1Q96PV0 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.4■□□□□ 0.86
SYNGAP1Q96PV0 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
SYNGAP1Q96PV0 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
SYNGAP1Q96PV0 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.39■□□□□ 0.86
SYNGAP1Q96PV0 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SYNGAP1Q96PV0 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SYNGAP1Q96PV0 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SYNGAP1Q96PV0 FABP5-202ENST00000396359 986 ntTSL 5 BASIC20.39■□□□□ 0.85
SYNGAP1Q96PV0 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC20.39■□□□□ 0.85
SYNGAP1Q96PV0 IGHV3-22-201ENST00000520721 359 ntBASIC20.39■□□□□ 0.85
SYNGAP1Q96PV0 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC20.39■□□□□ 0.85
SYNGAP1Q96PV0 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.39■□□□□ 0.85
SYNGAP1Q96PV0 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.39■□□□□ 0.85
SYNGAP1Q96PV0 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.39■□□□□ 0.85
SYNGAP1Q96PV0 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.39■□□□□ 0.85
SYNGAP1Q96PV0 AL138781.2-201ENST00000617896 1843 ntBASIC20.39■□□□□ 0.85
SYNGAP1Q96PV0 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SYNGAP1Q96PV0 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SYNGAP1Q96PV0 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
SYNGAP1Q96PV0 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SYNGAP1Q96PV0 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.39■□□□□ 0.85
SYNGAP1Q96PV0 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.39■□□□□ 0.85
SYNGAP1Q96PV0 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SYNGAP1Q96PV0 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.39■□□□□ 0.85
SYNGAP1Q96PV0 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.39■□□□□ 0.85
SYNGAP1Q96PV0 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SYNGAP1Q96PV0 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.38■□□□□ 0.85
SYNGAP1Q96PV0 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SYNGAP1Q96PV0 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
SYNGAP1Q96PV0 AL356309.3-201ENST00000624132 1934 ntBASIC20.38■□□□□ 0.85
SYNGAP1Q96PV0 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.38■□□□□ 0.85
SYNGAP1Q96PV0 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SYNGAP1Q96PV0 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.38■□□□□ 0.85
SYNGAP1Q96PV0 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC20.38■□□□□ 0.85
SYNGAP1Q96PV0 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.38■□□□□ 0.85
SYNGAP1Q96PV0 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SYNGAP1Q96PV0 AC092183.1-201ENST00000469884 875 ntBASIC20.38■□□□□ 0.85
SYNGAP1Q96PV0 AC112698.1-201ENST00000510299 916 ntBASIC20.38■□□□□ 0.85
SYNGAP1Q96PV0 AC092865.5-201ENST00000545435 363 ntBASIC20.38■□□□□ 0.85
SYNGAP1Q96PV0 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.38■□□□□ 0.85
SYNGAP1Q96PV0 AL139288.1-201ENST00000623748 933 ntBASIC20.38■□□□□ 0.85
SYNGAP1Q96PV0 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SYNGAP1Q96PV0 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.38■□□□□ 0.85
SYNGAP1Q96PV0 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SYNGAP1Q96PV0 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SYNGAP1Q96PV0 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SYNGAP1Q96PV0 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
SYNGAP1Q96PV0 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SYNGAP1Q96PV0 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SYNGAP1Q96PV0 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.38■□□□□ 0.85
SYNGAP1Q96PV0 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
SYNGAP1Q96PV0 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
SYNGAP1Q96PV0 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.37■□□□□ 0.85
SYNGAP1Q96PV0 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SYNGAP1Q96PV0 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SYNGAP1Q96PV0 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SYNGAP1Q96PV0 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SYNGAP1Q96PV0 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
SYNGAP1Q96PV0 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.37■□□□□ 0.85
SYNGAP1Q96PV0 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
SYNGAP1Q96PV0 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.37■□□□□ 0.85
SYNGAP1Q96PV0 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
SYNGAP1Q96PV0 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SYNGAP1Q96PV0 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC20.37■□□□□ 0.85
SYNGAP1Q96PV0 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SYNGAP1Q96PV0 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SYNGAP1Q96PV0 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SYNGAP1Q96PV0 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SYNGAP1Q96PV0 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SYNGAP1Q96PV0 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
SYNGAP1Q96PV0 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SYNGAP1Q96PV0 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.37■□□□□ 0.85
SYNGAP1Q96PV0 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SYNGAP1Q96PV0 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SYNGAP1Q96PV0 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
SYNGAP1Q96PV0 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SYNGAP1Q96PV0 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SYNGAP1Q96PV0 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SYNGAP1Q96PV0 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.36■□□□□ 0.85
SYNGAP1Q96PV0 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SYNGAP1Q96PV0 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SYNGAP1Q96PV0 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SYNGAP1Q96PV0 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SYNGAP1Q96PV0 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SYNGAP1Q96PV0 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SYNGAP1Q96PV0 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms