Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
CCDC168Q8NDH2 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.96□□□□□ -0.01
CCDC168Q8NDH2 FAM207CP-201ENST00000443486 507 ntBASIC14.96□□□□□ -0.01
CCDC168Q8NDH2 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC168Q8NDH2 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.96□□□□□ -0.01
CCDC168Q8NDH2 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.96□□□□□ -0.01
CCDC168Q8NDH2 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.96□□□□□ -0.01
CCDC168Q8NDH2 AL353135.1-201ENST00000606729 504 ntBASIC14.96□□□□□ -0.01
CCDC168Q8NDH2 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.96□□□□□ -0.01
CCDC168Q8NDH2 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC168Q8NDH2 UROS-202ENST00000368778 1556 ntTSL 2 BASIC14.96□□□□□ -0.01
CCDC168Q8NDH2 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC168Q8NDH2 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
CCDC168Q8NDH2 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
CCDC168Q8NDH2 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
CCDC168Q8NDH2 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
CCDC168Q8NDH2 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CCDC168Q8NDH2 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CCDC168Q8NDH2 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC14.96□□□□□ -0.02
CCDC168Q8NDH2 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC14.96□□□□□ -0.02
CCDC168Q8NDH2 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CCDC168Q8NDH2 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
CCDC168Q8NDH2 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC168Q8NDH2 AC067863.1-201ENST00000494933 530 ntBASIC14.95□□□□□ -0.02
CCDC168Q8NDH2 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC168Q8NDH2 AC008761.3-201ENST00000624803 892 ntBASIC14.95□□□□□ -0.02
CCDC168Q8NDH2 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC14.95□□□□□ -0.02
CCDC168Q8NDH2 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC168Q8NDH2 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC168Q8NDH2 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC168Q8NDH2 LINC01006-201ENST00000333319 2292 ntBASIC14.95□□□□□ -0.02
CCDC168Q8NDH2 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC168Q8NDH2 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC168Q8NDH2 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC168Q8NDH2 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC168Q8NDH2 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC168Q8NDH2 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
CCDC168Q8NDH2 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC168Q8NDH2 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.95□□□□□ -0.02
CCDC168Q8NDH2 KRT18P65-201ENST00000439811 1286 ntBASIC14.95□□□□□ -0.02
CCDC168Q8NDH2 AC245100.3-201ENST00000441281 285 ntBASIC14.95□□□□□ -0.02
CCDC168Q8NDH2 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC168Q8NDH2 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC168Q8NDH2 IGHV3-71-201ENST00000523324 359 ntBASIC14.95□□□□□ -0.02
CCDC168Q8NDH2 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.95□□□□□ -0.02
CCDC168Q8NDH2 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC168Q8NDH2 SDHAP2-201ENST00000455183 2001 ntBASIC14.95□□□□□ -0.02
CCDC168Q8NDH2 AC005082.1-201ENST00000413042 2259 ntBASIC14.95□□□□□ -0.02
CCDC168Q8NDH2 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CCDC168Q8NDH2 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC168Q8NDH2 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC168Q8NDH2 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC168Q8NDH2 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC168Q8NDH2 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCDC168Q8NDH2 KRT8P47-201ENST00000604727 1398 ntBASIC14.95□□□□□ -0.02
CCDC168Q8NDH2 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC14.95□□□□□ -0.02
CCDC168Q8NDH2 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.95□□□□□ -0.02
CCDC168Q8NDH2 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC14.95□□□□□ -0.02
CCDC168Q8NDH2 AC012676.1-201ENST00000574705 1949 ntBASIC14.94□□□□□ -0.02
CCDC168Q8NDH2 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC168Q8NDH2 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC168Q8NDH2 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC168Q8NDH2 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.94□□□□□ -0.02
CCDC168Q8NDH2 AC027307.3-201ENST00000594262 1100 ntBASIC14.94□□□□□ -0.02
CCDC168Q8NDH2 AC025048.6-201ENST00000634326 1161 ntBASIC14.94□□□□□ -0.02
CCDC168Q8NDH2 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC168Q8NDH2 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.94□□□□□ -0.02
CCDC168Q8NDH2 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC168Q8NDH2 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC168Q8NDH2 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC168Q8NDH2 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC168Q8NDH2 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CCDC168Q8NDH2 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC168Q8NDH2 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC14.94□□□□□ -0.02
CCDC168Q8NDH2 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC168Q8NDH2 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC168Q8NDH2 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC168Q8NDH2 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.94□□□□□ -0.02
CCDC168Q8NDH2 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.94□□□□□ -0.02
CCDC168Q8NDH2 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.94□□□□□ -0.02
CCDC168Q8NDH2 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
CCDC168Q8NDH2 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.94□□□□□ -0.02
CCDC168Q8NDH2 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.94□□□□□ -0.02
CCDC168Q8NDH2 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.94□□□□□ -0.02
CCDC168Q8NDH2 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
CCDC168Q8NDH2 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC14.94□□□□□ -0.02
CCDC168Q8NDH2 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CCDC168Q8NDH2 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
CCDC168Q8NDH2 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCDC168Q8NDH2 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CCDC168Q8NDH2 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCDC168Q8NDH2 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.93□□□□□ -0.02
CCDC168Q8NDH2 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.93□□□□□ -0.02
CCDC168Q8NDH2 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.93□□□□□ -0.02
CCDC168Q8NDH2 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.93□□□□□ -0.02
CCDC168Q8NDH2 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.93□□□□□ -0.02
CCDC168Q8NDH2 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.93□□□□□ -0.02
CCDC168Q8NDH2 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CCDC168Q8NDH2 NCF1C-201ENST00000438382 1427 ntBASIC14.93□□□□□ -0.02
CCDC168Q8NDH2 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms