Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NPAS4Q8IUM7 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NPAS4Q8IUM7 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NPAS4Q8IUM7 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NPAS4Q8IUM7 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.21■□□□□ 0.67
NPAS4Q8IUM7 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NPAS4Q8IUM7 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.21■□□□□ 0.67
NPAS4Q8IUM7 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
NPAS4Q8IUM7 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.21■□□□□ 0.67
NPAS4Q8IUM7 AC002347.1-201ENST00000569543 541 ntBASIC19.21■□□□□ 0.67
NPAS4Q8IUM7 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NPAS4Q8IUM7 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.21■□□□□ 0.67
NPAS4Q8IUM7 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.21■□□□□ 0.67
NPAS4Q8IUM7 AC022898.2-201ENST00000616822 1312 ntBASIC19.21■□□□□ 0.67
NPAS4Q8IUM7 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NPAS4Q8IUM7 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NPAS4Q8IUM7 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NPAS4Q8IUM7 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPAS4Q8IUM7 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NPAS4Q8IUM7 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
NPAS4Q8IUM7 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC19.2■□□□□ 0.66
NPAS4Q8IUM7 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPAS4Q8IUM7 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.2■□□□□ 0.66
NPAS4Q8IUM7 AC073621.1-201ENST00000392730 636 ntBASIC19.2■□□□□ 0.66
NPAS4Q8IUM7 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.2■□□□□ 0.66
NPAS4Q8IUM7 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.2■□□□□ 0.66
NPAS4Q8IUM7 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NPAS4Q8IUM7 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NPAS4Q8IUM7 AC112482.1-201ENST00000492080 688 ntBASIC19.2■□□□□ 0.66
NPAS4Q8IUM7 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.2■□□□□ 0.66
NPAS4Q8IUM7 AC136632.2-201ENST00000512891 861 ntBASIC19.2■□□□□ 0.66
NPAS4Q8IUM7 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.2■□□□□ 0.66
NPAS4Q8IUM7 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NPAS4Q8IUM7 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NPAS4Q8IUM7 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.2■□□□□ 0.66
NPAS4Q8IUM7 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC19.2■□□□□ 0.66
NPAS4Q8IUM7 AC073592.5-201ENST00000624854 528 ntBASIC19.2■□□□□ 0.66
NPAS4Q8IUM7 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NPAS4Q8IUM7 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NPAS4Q8IUM7 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
NPAS4Q8IUM7 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPAS4Q8IUM7 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
NPAS4Q8IUM7 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NPAS4Q8IUM7 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NPAS4Q8IUM7 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NPAS4Q8IUM7 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
NPAS4Q8IUM7 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NPAS4Q8IUM7 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NPAS4Q8IUM7 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
NPAS4Q8IUM7 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NPAS4Q8IUM7 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.19■□□□□ 0.66
NPAS4Q8IUM7 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.19■□□□□ 0.66
NPAS4Q8IUM7 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
NPAS4Q8IUM7 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.19■□□□□ 0.66
NPAS4Q8IUM7 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NPAS4Q8IUM7 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NPAS4Q8IUM7 COX5BP2-201ENST00000392354 334 ntBASIC19.19■□□□□ 0.66
NPAS4Q8IUM7 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC19.19■□□□□ 0.66
NPAS4Q8IUM7 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.19■□□□□ 0.66
NPAS4Q8IUM7 DUTP2-201ENST00000519164 463 ntBASIC19.19■□□□□ 0.66
NPAS4Q8IUM7 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC19.19■□□□□ 0.66
NPAS4Q8IUM7 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NPAS4Q8IUM7 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.19■□□□□ 0.66
NPAS4Q8IUM7 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.19■□□□□ 0.66
NPAS4Q8IUM7 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.19■□□□□ 0.66
NPAS4Q8IUM7 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
NPAS4Q8IUM7 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.19■□□□□ 0.66
NPAS4Q8IUM7 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.19■□□□□ 0.66
NPAS4Q8IUM7 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NPAS4Q8IUM7 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NPAS4Q8IUM7 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.19■□□□□ 0.66
NPAS4Q8IUM7 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NPAS4Q8IUM7 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.19■□□□□ 0.66
NPAS4Q8IUM7 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NPAS4Q8IUM7 AC004817.3-201ENST00000602957 2129 ntBASIC19.19■□□□□ 0.66
NPAS4Q8IUM7 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.19■□□□□ 0.66
NPAS4Q8IUM7 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.19■□□□□ 0.66
NPAS4Q8IUM7 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NPAS4Q8IUM7 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
NPAS4Q8IUM7 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
NPAS4Q8IUM7 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
NPAS4Q8IUM7 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NPAS4Q8IUM7 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NPAS4Q8IUM7 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NPAS4Q8IUM7 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.18■□□□□ 0.66
NPAS4Q8IUM7 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
NPAS4Q8IUM7 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPAS4Q8IUM7 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.18■□□□□ 0.66
NPAS4Q8IUM7 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPAS4Q8IUM7 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NPAS4Q8IUM7 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.18■□□□□ 0.66
NPAS4Q8IUM7 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPAS4Q8IUM7 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NPAS4Q8IUM7 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
NPAS4Q8IUM7 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
NPAS4Q8IUM7 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.18■□□□□ 0.66
NPAS4Q8IUM7 AC108751.1-201ENST00000490852 363 ntBASIC19.18■□□□□ 0.66
NPAS4Q8IUM7 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.18■□□□□ 0.66
NPAS4Q8IUM7 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.18■□□□□ 0.66
NPAS4Q8IUM7 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms