Protein–RNA interactions for Protein: Q8BVF4

Ccdc30, Coiled-coil domain-containing protein 30, mousemouse

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc30Q8BVF4 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc30Q8BVF4 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc30Q8BVF4 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc30Q8BVF4 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc30Q8BVF4 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc30Q8BVF4 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
Ccdc30Q8BVF4 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc30Q8BVF4 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc30Q8BVF4 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Ccdc30Q8BVF4 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc30Q8BVF4 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Ccdc30Q8BVF4 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc30Q8BVF4 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Ccdc30Q8BVF4 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc30Q8BVF4 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc30Q8BVF4 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc30Q8BVF4 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc30Q8BVF4 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc30Q8BVF4 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Ccdc30Q8BVF4 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc30Q8BVF4 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc30Q8BVF4 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
Ccdc30Q8BVF4 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc30Q8BVF4 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC19.43■□□□□ 0.7
Ccdc30Q8BVF4 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc30Q8BVF4 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Ccdc30Q8BVF4 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Ccdc30Q8BVF4 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc30Q8BVF4 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc30Q8BVF4 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc30Q8BVF4 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc30Q8BVF4 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc30Q8BVF4 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc30Q8BVF4 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc30Q8BVF4 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc30Q8BVF4 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Ccdc30Q8BVF4 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Ccdc30Q8BVF4 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc30Q8BVF4 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc30Q8BVF4 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC19.42■□□□□ 0.7
Ccdc30Q8BVF4 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc30Q8BVF4 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc30Q8BVF4 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc30Q8BVF4 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC19.42■□□□□ 0.7
Ccdc30Q8BVF4 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC19.42■□□□□ 0.7
Ccdc30Q8BVF4 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc30Q8BVF4 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc30Q8BVF4 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc30Q8BVF4 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc30Q8BVF4 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc30Q8BVF4 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc30Q8BVF4 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc30Q8BVF4 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC19.42■□□□□ 0.7
Ccdc30Q8BVF4 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc30Q8BVF4 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc30Q8BVF4 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Ccdc30Q8BVF4 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Ccdc30Q8BVF4 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc30Q8BVF4 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Ccdc30Q8BVF4 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC19.41■□□□□ 0.7
Ccdc30Q8BVF4 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc30Q8BVF4 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc30Q8BVF4 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc30Q8BVF4 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC19.41■□□□□ 0.7
Ccdc30Q8BVF4 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Ccdc30Q8BVF4 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc30Q8BVF4 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc30Q8BVF4 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc30Q8BVF4 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc30Q8BVF4 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc30Q8BVF4 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc30Q8BVF4 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc30Q8BVF4 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc30Q8BVF4 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc30Q8BVF4 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc30Q8BVF4 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc30Q8BVF4 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Ccdc30Q8BVF4 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC19.41■□□□□ 0.7
Ccdc30Q8BVF4 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC19.41■□□□□ 0.7
Ccdc30Q8BVF4 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc30Q8BVF4 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc30Q8BVF4 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC19.4■□□□□ 0.7
Ccdc30Q8BVF4 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc30Q8BVF4 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc30Q8BVF4 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC19.4■□□□□ 0.7
Ccdc30Q8BVF4 Gm5364-201ENSMUST00000216789 889 ntBASIC19.4■□□□□ 0.7
Ccdc30Q8BVF4 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC19.4■□□□□ 0.7
Ccdc30Q8BVF4 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc30Q8BVF4 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc30Q8BVF4 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc30Q8BVF4 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Ccdc30Q8BVF4 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC19.4■□□□□ 0.7
Ccdc30Q8BVF4 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Ccdc30Q8BVF4 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc30Q8BVF4 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc30Q8BVF4 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc30Q8BVF4 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc30Q8BVF4 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc30Q8BVF4 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc30Q8BVF4 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms