Protein–RNA interactions for Protein: Q7TN05

Ap1s3, AP-1 complex subunit sigma-3, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap1s3Q7TN05 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ap1s3Q7TN05 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Ap1s3Q7TN05 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC13.13□□□□□ -0.31
Ap1s3Q7TN05 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ap1s3Q7TN05 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ap1s3Q7TN05 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ap1s3Q7TN05 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ap1s3Q7TN05 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
Ap1s3Q7TN05 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ap1s3Q7TN05 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ap1s3Q7TN05 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ap1s3Q7TN05 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ap1s3Q7TN05 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ap1s3Q7TN05 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ap1s3Q7TN05 Gm10849-201ENSMUST00000100397 618 ntBASIC13.12□□□□□ -0.31
Ap1s3Q7TN05 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC13.12□□□□□ -0.31
Ap1s3Q7TN05 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ap1s3Q7TN05 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ap1s3Q7TN05 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC13.12□□□□□ -0.31
Ap1s3Q7TN05 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ap1s3Q7TN05 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Ap1s3Q7TN05 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ap1s3Q7TN05 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ap1s3Q7TN05 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ap1s3Q7TN05 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ap1s3Q7TN05 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ap1s3Q7TN05 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ap1s3Q7TN05 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ap1s3Q7TN05 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ap1s3Q7TN05 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ap1s3Q7TN05 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ap1s3Q7TN05 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ap1s3Q7TN05 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ap1s3Q7TN05 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ap1s3Q7TN05 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.12□□□□□ -0.31
Ap1s3Q7TN05 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ap1s3Q7TN05 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ap1s3Q7TN05 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ap1s3Q7TN05 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ap1s3Q7TN05 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ap1s3Q7TN05 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ap1s3Q7TN05 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ap1s3Q7TN05 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ap1s3Q7TN05 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ap1s3Q7TN05 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.11□□□□□ -0.31
Ap1s3Q7TN05 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.11□□□□□ -0.31
Ap1s3Q7TN05 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ap1s3Q7TN05 Wnt10b-206ENSMUST00000228546 2709 ntBASIC13.11□□□□□ -0.31
Ap1s3Q7TN05 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Ap1s3Q7TN05 Gm11336-201ENSMUST00000118168 334 ntBASIC13.11□□□□□ -0.31
Ap1s3Q7TN05 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC13.11□□□□□ -0.31
Ap1s3Q7TN05 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC13.11□□□□□ -0.31
Ap1s3Q7TN05 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ap1s3Q7TN05 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC13.11□□□□□ -0.31
Ap1s3Q7TN05 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC13.11□□□□□ -0.31
Ap1s3Q7TN05 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ap1s3Q7TN05 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ap1s3Q7TN05 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC13.11□□□□□ -0.31
Ap1s3Q7TN05 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ap1s3Q7TN05 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ap1s3Q7TN05 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ap1s3Q7TN05 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ap1s3Q7TN05 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ap1s3Q7TN05 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ap1s3Q7TN05 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ap1s3Q7TN05 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ap1s3Q7TN05 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ap1s3Q7TN05 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ap1s3Q7TN05 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ap1s3Q7TN05 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ap1s3Q7TN05 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ap1s3Q7TN05 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ap1s3Q7TN05 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ap1s3Q7TN05 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ap1s3Q7TN05 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ap1s3Q7TN05 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ap1s3Q7TN05 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ap1s3Q7TN05 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ap1s3Q7TN05 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Ap1s3Q7TN05 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ap1s3Q7TN05 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ap1s3Q7TN05 Gm12933-201ENSMUST00000120203 872 ntBASIC13.1□□□□□ -0.31
Ap1s3Q7TN05 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ap1s3Q7TN05 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC13.1□□□□□ -0.31
Ap1s3Q7TN05 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ap1s3Q7TN05 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ap1s3Q7TN05 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ap1s3Q7TN05 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ap1s3Q7TN05 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ap1s3Q7TN05 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ap1s3Q7TN05 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ap1s3Q7TN05 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ap1s3Q7TN05 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC13.1□□□□□ -0.31
Ap1s3Q7TN05 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ap1s3Q7TN05 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ap1s3Q7TN05 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ap1s3Q7TN05 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ap1s3Q7TN05 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC13.1□□□□□ -0.31
Ap1s3Q7TN05 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ap1s3Q7TN05 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms