Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 POLD4-207ENST00000531239 584 ntTSL 2 BASIC24.77■■□□□ 1.56
MSH6P52701 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC24.77■■□□□ 1.56
MSH6P52701 RIN3-211ENST00000557762 517 ntTSL 3 BASIC24.77■■□□□ 1.56
MSH6P52701 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC24.77■■□□□ 1.56
MSH6P52701 AC105339.1-204ENST00000636249 355 ntBASIC24.77■■□□□ 1.56
MSH6P52701 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
MSH6P52701 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.56
MSH6P52701 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
MSH6P52701 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
MSH6P52701 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC24.76■■□□□ 1.55
MSH6P52701 AL158211.5-201ENST00000623583 2518 ntBASIC24.76■■□□□ 1.55
MSH6P52701 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC24.76■■□□□ 1.55
MSH6P52701 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC24.76■■□□□ 1.55
MSH6P52701 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC24.76■■□□□ 1.55
MSH6P52701 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
MSH6P52701 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC24.76■■□□□ 1.55
MSH6P52701 AL390955.2-201ENST00000603032 514 ntBASIC24.76■■□□□ 1.55
MSH6P52701 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
MSH6P52701 SLC25A24-204ENST00000569674 2357 ntBASIC24.76■■□□□ 1.55
MSH6P52701 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
MSH6P52701 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
MSH6P52701 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC24.75■■□□□ 1.55
MSH6P52701 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC24.75■■□□□ 1.55
MSH6P52701 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
MSH6P52701 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
MSH6P52701 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
MSH6P52701 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
MSH6P52701 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC24.75■■□□□ 1.55
MSH6P52701 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
MSH6P52701 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
MSH6P52701 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
MSH6P52701 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
MSH6P52701 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
MSH6P52701 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
MSH6P52701 NEK7-201ENST00000367383 586 ntTSL 2 BASIC24.75■■□□□ 1.55
MSH6P52701 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
MSH6P52701 GK-202ENST00000378941 458 ntTSL 3 BASIC24.75■■□□□ 1.55
MSH6P52701 RHOQP3-201ENST00000437982 621 ntBASIC24.75■■□□□ 1.55
MSH6P52701 AC074386.1-202ENST00000463561 864 ntBASIC24.75■■□□□ 1.55
MSH6P52701 CCDC74BP1-201ENST00000508880 1123 ntBASIC24.75■■□□□ 1.55
MSH6P52701 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC24.75■■□□□ 1.55
MSH6P52701 AQP6-203ENST00000551733 849 ntTSL 3 BASIC24.75■■□□□ 1.55
MSH6P52701 CYB561-217ENST00000582997 877 ntTSL 5 BASIC24.75■■□□□ 1.55
MSH6P52701 AL805961.1-202ENST00000641562 540 ntBASIC24.75■■□□□ 1.55
MSH6P52701 AC092902.6-201ENST00000641783 218 ntBASIC24.75■■□□□ 1.55
MSH6P52701 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC24.75■■□□□ 1.55
MSH6P52701 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
MSH6P52701 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC24.75■■□□□ 1.55
MSH6P52701 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
MSH6P52701 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
MSH6P52701 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
MSH6P52701 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
MSH6P52701 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
MSH6P52701 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
MSH6P52701 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC24.74■■□□□ 1.55
MSH6P52701 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
MSH6P52701 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
MSH6P52701 ADM-207ENST00000530439 1839 ntTSL 2 BASIC24.74■■□□□ 1.55
MSH6P52701 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
MSH6P52701 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC24.74■■□□□ 1.55
MSH6P52701 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC24.74■■□□□ 1.55
MSH6P52701 AC087641.1-201ENST00000557561 1021 ntBASIC24.74■■□□□ 1.55
MSH6P52701 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC24.74■■□□□ 1.55
MSH6P52701 LINC00628-201ENST00000628516 1289 ntBASIC24.74■■□□□ 1.55
MSH6P52701 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
MSH6P52701 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC24.74■■□□□ 1.55
MSH6P52701 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
MSH6P52701 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
MSH6P52701 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
MSH6P52701 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
MSH6P52701 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
MSH6P52701 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
MSH6P52701 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
MSH6P52701 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
MSH6P52701 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
MSH6P52701 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
MSH6P52701 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC24.73■■□□□ 1.55
MSH6P52701 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
MSH6P52701 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC24.73■■□□□ 1.55
MSH6P52701 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
MSH6P52701 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
MSH6P52701 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
MSH6P52701 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC24.73■■□□□ 1.55
MSH6P52701 RNA5SP421-201ENST00000516864 134 ntBASIC24.73■■□□□ 1.55
MSH6P52701 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC24.73■■□□□ 1.55
MSH6P52701 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC24.73■■□□□ 1.55
MSH6P52701 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC24.73■■□□□ 1.55
MSH6P52701 AC005225.4-201ENST00000557330 545 ntBASIC24.73■■□□□ 1.55
MSH6P52701 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC24.73■■□□□ 1.55
MSH6P52701 AC022145.2-201ENST00000598203 171 ntBASIC24.73■■□□□ 1.55
MSH6P52701 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC24.73■■□□□ 1.55
MSH6P52701 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
MSH6P52701 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
MSH6P52701 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
MSH6P52701 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC24.73■■□□□ 1.55
MSH6P52701 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
MSH6P52701 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
MSH6P52701 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
MSH6P52701 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
MSH6P52701 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms