Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.01■□□□□ 0.47
COL4A2P08572 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.01■□□□□ 0.47
COL4A2P08572 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.01■□□□□ 0.47
COL4A2P08572 RPL28-205ENST00000558131 444 ntTSL 5 BASIC18.01■□□□□ 0.47
COL4A2P08572 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.01■□□□□ 0.47
COL4A2P08572 C20orf181-201ENST00000623918 480 ntBASIC18.01■□□□□ 0.47
COL4A2P08572 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.01■□□□□ 0.47
COL4A2P08572 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
COL4A2P08572 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL4A2P08572 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL4A2P08572 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL4A2P08572 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
COL4A2P08572 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
COL4A2P08572 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.01■□□□□ 0.47
COL4A2P08572 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.01■□□□□ 0.47
COL4A2P08572 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL4A2P08572 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.01■□□□□ 0.47
COL4A2P08572 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.01■□□□□ 0.47
COL4A2P08572 MIR4469-201ENST00000583919 79 ntBASIC18.01■□□□□ 0.47
COL4A2P08572 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.01■□□□□ 0.47
COL4A2P08572 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.01■□□□□ 0.47
COL4A2P08572 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
COL4A2P08572 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18■□□□□ 0.47
COL4A2P08572 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18■□□□□ 0.47
COL4A2P08572 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18■□□□□ 0.47
COL4A2P08572 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18■□□□□ 0.47
COL4A2P08572 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18■□□□□ 0.47
COL4A2P08572 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18■□□□□ 0.47
COL4A2P08572 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL4A2P08572 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL4A2P08572 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
COL4A2P08572 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL4A2P08572 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18■□□□□ 0.47
COL4A2P08572 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18■□□□□ 0.47
COL4A2P08572 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18■□□□□ 0.47
COL4A2P08572 AC079781.4-201ENST00000641908 219 ntBASIC18■□□□□ 0.47
COL4A2P08572 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL4A2P08572 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
COL4A2P08572 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL4A2P08572 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL4A2P08572 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18■□□□□ 0.47
COL4A2P08572 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL4A2P08572 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL4A2P08572 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL4A2P08572 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL4A2P08572 AP000344.2-201ENST00000512987 629 ntBASIC17.99■□□□□ 0.47
COL4A2P08572 IGHV3-65-201ENST00000523210 341 ntBASIC17.99■□□□□ 0.47
COL4A2P08572 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
COL4A2P08572 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.99■□□□□ 0.47
COL4A2P08572 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.99■□□□□ 0.47
COL4A2P08572 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.99■□□□□ 0.47
COL4A2P08572 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL4A2P08572 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL4A2P08572 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
COL4A2P08572 AL049757.1-201ENST00000616842 1596 ntBASIC17.99■□□□□ 0.47
COL4A2P08572 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
COL4A2P08572 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.99■□□□□ 0.47
COL4A2P08572 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
COL4A2P08572 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.98■□□□□ 0.47
COL4A2P08572 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.98■□□□□ 0.47
COL4A2P08572 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL4A2P08572 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
COL4A2P08572 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL4A2P08572 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL4A2P08572 MRPL20P1-201ENST00000400819 433 ntBASIC17.98■□□□□ 0.47
COL4A2P08572 CNN2P11-201ENST00000429351 262 ntBASIC17.98■□□□□ 0.47
COL4A2P08572 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.98■□□□□ 0.47
COL4A2P08572 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL4A2P08572 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.98■□□□□ 0.47
COL4A2P08572 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
COL4A2P08572 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.98■□□□□ 0.47
COL4A2P08572 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.98■□□□□ 0.47
COL4A2P08572 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.98■□□□□ 0.47
COL4A2P08572 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL4A2P08572 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.98■□□□□ 0.47
COL4A2P08572 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL4A2P08572 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
COL4A2P08572 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
COL4A2P08572 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL4A2P08572 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.98■□□□□ 0.47
COL4A2P08572 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.98■□□□□ 0.47
COL4A2P08572 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
COL4A2P08572 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL4A2P08572 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL4A2P08572 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.98■□□□□ 0.47
COL4A2P08572 AC003669.1-201ENST00000334569 611 ntBASIC17.98■□□□□ 0.47
COL4A2P08572 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.98■□□□□ 0.47
COL4A2P08572 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL4A2P08572 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.98■□□□□ 0.47
COL4A2P08572 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.98■□□□□ 0.47
COL4A2P08572 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL4A2P08572 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.98■□□□□ 0.47
COL4A2P08572 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.98■□□□□ 0.47
COL4A2P08572 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.98■□□□□ 0.47
COL4A2P08572 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
COL4A2P08572 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.98■□□□□ 0.47
COL4A2P08572 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.98■□□□□ 0.47
COL4A2P08572 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.98■□□□□ 0.47
COL4A2P08572 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.98■□□□□ 0.47
COL4A2P08572 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms