Protein–RNA interactions for Protein: A1L190

SYCE3, Synaptonemal complex central element protein 3, humanhuman

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE3A1L190 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SYCE3A1L190 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
SYCE3A1L190 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SYCE3A1L190 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
SYCE3A1L190 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.52■□□□□ 0.88
SYCE3A1L190 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SYCE3A1L190 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC20.52■□□□□ 0.88
SYCE3A1L190 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.87
SYCE3A1L190 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SYCE3A1L190 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.52■□□□□ 0.87
SYCE3A1L190 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SYCE3A1L190 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SYCE3A1L190 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SYCE3A1L190 CA12-203ENST00000422263 2556 ntTSL 2 BASIC20.51■□□□□ 0.87
SYCE3A1L190 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SYCE3A1L190 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC20.51■□□□□ 0.87
SYCE3A1L190 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.51■□□□□ 0.87
SYCE3A1L190 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC20.51■□□□□ 0.87
SYCE3A1L190 PCDHA14-201ENST00000506751 2298 ntBASIC20.51■□□□□ 0.87
SYCE3A1L190 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC20.51■□□□□ 0.87
SYCE3A1L190 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC20.51■□□□□ 0.87
SYCE3A1L190 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SYCE3A1L190 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC20.51■□□□□ 0.87
SYCE3A1L190 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SYCE3A1L190 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC20.51■□□□□ 0.87
SYCE3A1L190 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SYCE3A1L190 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SYCE3A1L190 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
SYCE3A1L190 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.51■□□□□ 0.87
SYCE3A1L190 FAM207BP-201ENST00000447172 505 ntBASIC20.51■□□□□ 0.87
SYCE3A1L190 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.51■□□□□ 0.87
SYCE3A1L190 AC133041.1-202ENST00000642053 222 ntBASIC20.51■□□□□ 0.87
SYCE3A1L190 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
SYCE3A1L190 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC20.51■□□□□ 0.87
SYCE3A1L190 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SYCE3A1L190 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC20.51■□□□□ 0.87
SYCE3A1L190 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.5■□□□□ 0.87
SYCE3A1L190 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.5■□□□□ 0.87
SYCE3A1L190 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SYCE3A1L190 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.5■□□□□ 0.87
SYCE3A1L190 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SYCE3A1L190 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SYCE3A1L190 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SYCE3A1L190 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.5■□□□□ 0.87
SYCE3A1L190 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
SYCE3A1L190 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.5■□□□□ 0.87
SYCE3A1L190 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SYCE3A1L190 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SYCE3A1L190 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SYCE3A1L190 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SYCE3A1L190 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SYCE3A1L190 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SYCE3A1L190 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SYCE3A1L190 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.5■□□□□ 0.87
SYCE3A1L190 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SYCE3A1L190 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SYCE3A1L190 LINC00304-203ENST00000565008 1864 ntBASIC20.5■□□□□ 0.87
SYCE3A1L190 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SYCE3A1L190 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SYCE3A1L190 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SYCE3A1L190 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
SYCE3A1L190 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.49■□□□□ 0.87
SYCE3A1L190 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SYCE3A1L190 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SYCE3A1L190 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
SYCE3A1L190 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SYCE3A1L190 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.49■□□□□ 0.87
SYCE3A1L190 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SYCE3A1L190 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.49■□□□□ 0.87
SYCE3A1L190 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.49■□□□□ 0.87
SYCE3A1L190 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.49■□□□□ 0.87
SYCE3A1L190 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
SYCE3A1L190 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SYCE3A1L190 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SYCE3A1L190 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC20.49■□□□□ 0.87
SYCE3A1L190 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SYCE3A1L190 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SYCE3A1L190 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SYCE3A1L190 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SYCE3A1L190 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SYCE3A1L190 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SYCE3A1L190 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC20.48■□□□□ 0.87
SYCE3A1L190 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SYCE3A1L190 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SYCE3A1L190 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC20.48■□□□□ 0.87
SYCE3A1L190 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC20.48■□□□□ 0.87
SYCE3A1L190 AC036111.1-201ENST00000533973 1582 ntBASIC20.48■□□□□ 0.87
SYCE3A1L190 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SYCE3A1L190 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SYCE3A1L190 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
SYCE3A1L190 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.48■□□□□ 0.87
SYCE3A1L190 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SYCE3A1L190 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
SYCE3A1L190 KRT17P3-201ENST00000420566 1262 ntBASIC20.48■□□□□ 0.87
SYCE3A1L190 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SYCE3A1L190 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.48■□□□□ 0.87
SYCE3A1L190 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
SYCE3A1L190 AC130371.2-201ENST00000619443 611 ntBASIC20.48■□□□□ 0.87
SYCE3A1L190 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC20.48■□□□□ 0.87
SYCE3A1L190 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms