Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PARPBPQ9NWS1 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PARPBPQ9NWS1 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PARPBPQ9NWS1 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.15■□□□□ 0.18
PARPBPQ9NWS1 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.15■□□□□ 0.18
PARPBPQ9NWS1 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PARPBPQ9NWS1 FAM86EP-206ENST00000510506 987 ntBASIC16.15■□□□□ 0.18
PARPBPQ9NWS1 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.15■□□□□ 0.18
PARPBPQ9NWS1 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.15■□□□□ 0.18
PARPBPQ9NWS1 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PARPBPQ9NWS1 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PARPBPQ9NWS1 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PARPBPQ9NWS1 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PARPBPQ9NWS1 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PARPBPQ9NWS1 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PARPBPQ9NWS1 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PARPBPQ9NWS1 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.15■□□□□ 0.18
PARPBPQ9NWS1 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PARPBPQ9NWS1 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.15■□□□□ 0.18
PARPBPQ9NWS1 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PARPBPQ9NWS1 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
PARPBPQ9NWS1 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.18
PARPBPQ9NWS1 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
PARPBPQ9NWS1 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
PARPBPQ9NWS1 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PARPBPQ9NWS1 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PARPBPQ9NWS1 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PARPBPQ9NWS1 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PARPBPQ9NWS1 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PARPBPQ9NWS1 NOC2LP1-202ENST00000452600 2235 ntBASIC16.14■□□□□ 0.17
PARPBPQ9NWS1 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PARPBPQ9NWS1 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.14■□□□□ 0.17
PARPBPQ9NWS1 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.14■□□□□ 0.17
PARPBPQ9NWS1 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PARPBPQ9NWS1 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PARPBPQ9NWS1 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PARPBPQ9NWS1 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.14■□□□□ 0.17
PARPBPQ9NWS1 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PARPBPQ9NWS1 PCED1CP-201ENST00000419887 785 ntBASIC16.14■□□□□ 0.17
PARPBPQ9NWS1 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.14■□□□□ 0.17
PARPBPQ9NWS1 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.14■□□□□ 0.17
PARPBPQ9NWS1 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.14■□□□□ 0.17
PARPBPQ9NWS1 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PARPBPQ9NWS1 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.14■□□□□ 0.17
PARPBPQ9NWS1 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.14■□□□□ 0.17
PARPBPQ9NWS1 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PARPBPQ9NWS1 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PARPBPQ9NWS1 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PARPBPQ9NWS1 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PARPBPQ9NWS1 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PARPBPQ9NWS1 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.14■□□□□ 0.17
PARPBPQ9NWS1 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.14■□□□□ 0.17
PARPBPQ9NWS1 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PARPBPQ9NWS1 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PARPBPQ9NWS1 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PARPBPQ9NWS1 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.14■□□□□ 0.17
PARPBPQ9NWS1 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PARPBPQ9NWS1 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.14■□□□□ 0.17
PARPBPQ9NWS1 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.14■□□□□ 0.17
PARPBPQ9NWS1 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PARPBPQ9NWS1 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PARPBPQ9NWS1 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PARPBPQ9NWS1 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.14■□□□□ 0.17
PARPBPQ9NWS1 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.13■□□□□ 0.17
PARPBPQ9NWS1 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PARPBPQ9NWS1 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PARPBPQ9NWS1 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PARPBPQ9NWS1 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
PARPBPQ9NWS1 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PARPBPQ9NWS1 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.13■□□□□ 0.17
PARPBPQ9NWS1 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.13■□□□□ 0.17
PARPBPQ9NWS1 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.13■□□□□ 0.17
PARPBPQ9NWS1 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.13■□□□□ 0.17
PARPBPQ9NWS1 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PARPBPQ9NWS1 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PARPBPQ9NWS1 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PARPBPQ9NWS1 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PARPBPQ9NWS1 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.13■□□□□ 0.17
PARPBPQ9NWS1 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
PARPBPQ9NWS1 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.13■□□□□ 0.17
PARPBPQ9NWS1 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.13■□□□□ 0.17
PARPBPQ9NWS1 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.13■□□□□ 0.17
PARPBPQ9NWS1 GPR32P1-201ENST00000601788 811 ntBASIC16.13■□□□□ 0.17
PARPBPQ9NWS1 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.13■□□□□ 0.17
PARPBPQ9NWS1 AP000550.4-202ENST00000639755 178 ntBASIC16.13■□□□□ 0.17
PARPBPQ9NWS1 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PARPBPQ9NWS1 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PARPBPQ9NWS1 AC005332.8-201ENST00000622750 2735 ntBASIC16.13■□□□□ 0.17
PARPBPQ9NWS1 AC099343.3-201ENST00000605834 2503 ntBASIC16.13■□□□□ 0.17
PARPBPQ9NWS1 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
PARPBPQ9NWS1 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
PARPBPQ9NWS1 AC005332.1-201ENST00000577698 1310 ntBASIC16.13■□□□□ 0.17
PARPBPQ9NWS1 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PARPBPQ9NWS1 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PARPBPQ9NWS1 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PARPBPQ9NWS1 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PARPBPQ9NWS1 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PARPBPQ9NWS1 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
PARPBPQ9NWS1 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.12■□□□□ 0.17
PARPBPQ9NWS1 LINC01126-201ENST00000623515 1646 ntBASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms