Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHD8Q9HCK8 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHD8Q9HCK8 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHD8Q9HCK8 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHD8Q9HCK8 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHD8Q9HCK8 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CHD8Q9HCK8 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.63■□□□□ 0.25
CHD8Q9HCK8 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.63■□□□□ 0.25
CHD8Q9HCK8 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.63■□□□□ 0.25
CHD8Q9HCK8 SPTLC1P1-201ENST00000447199 261 ntBASIC16.63■□□□□ 0.25
CHD8Q9HCK8 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC16.63■□□□□ 0.25
CHD8Q9HCK8 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.63■□□□□ 0.25
CHD8Q9HCK8 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHD8Q9HCK8 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.63■□□□□ 0.25
CHD8Q9HCK8 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.63■□□□□ 0.25
CHD8Q9HCK8 AC099522.2-201ENST00000607001 744 ntBASIC16.63■□□□□ 0.25
CHD8Q9HCK8 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.63■□□□□ 0.25
CHD8Q9HCK8 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHD8Q9HCK8 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHD8Q9HCK8 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.62■□□□□ 0.25
CHD8Q9HCK8 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHD8Q9HCK8 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHD8Q9HCK8 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHD8Q9HCK8 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CHD8Q9HCK8 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHD8Q9HCK8 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHD8Q9HCK8 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHD8Q9HCK8 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.62■□□□□ 0.25
CHD8Q9HCK8 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
CHD8Q9HCK8 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.62■□□□□ 0.25
CHD8Q9HCK8 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.62■□□□□ 0.25
CHD8Q9HCK8 AL592309.1-201ENST00000443127 649 ntBASIC16.62■□□□□ 0.25
CHD8Q9HCK8 SLC25A39P2-201ENST00000537614 270 ntBASIC16.62■□□□□ 0.25
CHD8Q9HCK8 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.62■□□□□ 0.25
CHD8Q9HCK8 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHD8Q9HCK8 AC008687.5-201ENST00000593746 558 ntBASIC16.62■□□□□ 0.25
CHD8Q9HCK8 AL162274.1-201ENST00000617191 1098 ntBASIC16.62■□□□□ 0.25
CHD8Q9HCK8 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.62■□□□□ 0.25
CHD8Q9HCK8 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CHD8Q9HCK8 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.62■□□□□ 0.25
CHD8Q9HCK8 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHD8Q9HCK8 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHD8Q9HCK8 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.62■□□□□ 0.25
CHD8Q9HCK8 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHD8Q9HCK8 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.62■□□□□ 0.25
CHD8Q9HCK8 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC16.62■□□□□ 0.25
CHD8Q9HCK8 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.62■□□□□ 0.25
CHD8Q9HCK8 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CHD8Q9HCK8 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHD8Q9HCK8 AC006116.8-202ENST00000587620 1550 ntBASIC16.61■□□□□ 0.25
CHD8Q9HCK8 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHD8Q9HCK8 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHD8Q9HCK8 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHD8Q9HCK8 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CHD8Q9HCK8 AC005237.2-201ENST00000434368 219 ntBASIC16.61■□□□□ 0.25
CHD8Q9HCK8 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHD8Q9HCK8 AC092658.1-201ENST00000505836 891 ntBASIC16.61■□□□□ 0.25
CHD8Q9HCK8 AC092552.1-201ENST00000547243 906 ntBASIC16.61■□□□□ 0.25
CHD8Q9HCK8 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHD8Q9HCK8 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.61■□□□□ 0.25
CHD8Q9HCK8 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHD8Q9HCK8 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHD8Q9HCK8 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHD8Q9HCK8 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHD8Q9HCK8 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHD8Q9HCK8 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CHD8Q9HCK8 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHD8Q9HCK8 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.61■□□□□ 0.25
CHD8Q9HCK8 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.61■□□□□ 0.25
CHD8Q9HCK8 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CHD8Q9HCK8 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHD8Q9HCK8 AC112698.1-201ENST00000510299 916 ntBASIC16.61■□□□□ 0.25
CHD8Q9HCK8 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
CHD8Q9HCK8 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHD8Q9HCK8 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
CHD8Q9HCK8 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.6■□□□□ 0.25
CHD8Q9HCK8 MTMR9LP-203ENST00000426597 1545 ntBASIC16.6■□□□□ 0.25
CHD8Q9HCK8 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHD8Q9HCK8 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.6■□□□□ 0.25
CHD8Q9HCK8 MIR658-201ENST00000385210 100 ntBASIC16.6■□□□□ 0.25
CHD8Q9HCK8 KRT17P7-201ENST00000451704 1104 ntBASIC16.6■□□□□ 0.25
CHD8Q9HCK8 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.6■□□□□ 0.25
CHD8Q9HCK8 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.6■□□□□ 0.25
CHD8Q9HCK8 MIR4538-201ENST00000581377 78 ntBASIC16.6■□□□□ 0.25
CHD8Q9HCK8 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.6■□□□□ 0.25
CHD8Q9HCK8 GPR182-203ENST00000622922 591 ntBASIC16.6■□□□□ 0.25
CHD8Q9HCK8 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.6■□□□□ 0.25
CHD8Q9HCK8 PCDHAC2-203ENST00000615316 3011 ntBASIC16.6■□□□□ 0.25
CHD8Q9HCK8 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHD8Q9HCK8 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHD8Q9HCK8 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHD8Q9HCK8 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.6■□□□□ 0.25
CHD8Q9HCK8 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHD8Q9HCK8 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.6■□□□□ 0.25
CHD8Q9HCK8 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHD8Q9HCK8 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.6■□□□□ 0.25
CHD8Q9HCK8 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
CHD8Q9HCK8 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHD8Q9HCK8 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.6■□□□□ 0.25
CHD8Q9HCK8 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms