Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CBX8Q9HC52 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CBX8Q9HC52 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
CBX8Q9HC52 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CBX8Q9HC52 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CBX8Q9HC52 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CBX8Q9HC52 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CBX8Q9HC52 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
CBX8Q9HC52 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CBX8Q9HC52 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.13■□□□□ 0.81
CBX8Q9HC52 RNF121-214ENST00000533380 870 ntTSL 3 BASIC20.13■□□□□ 0.81
CBX8Q9HC52 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.13■□□□□ 0.81
CBX8Q9HC52 SLC25A1P4-201ENST00000567977 778 ntBASIC20.13■□□□□ 0.81
CBX8Q9HC52 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
CBX8Q9HC52 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CBX8Q9HC52 UBALD1-205ENST00000590891 2641 ntBASIC20.13■□□□□ 0.81
CBX8Q9HC52 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CBX8Q9HC52 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CBX8Q9HC52 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CBX8Q9HC52 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CBX8Q9HC52 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CBX8Q9HC52 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.12■□□□□ 0.81
CBX8Q9HC52 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC20.12■□□□□ 0.81
CBX8Q9HC52 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CBX8Q9HC52 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CBX8Q9HC52 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CBX8Q9HC52 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CBX8Q9HC52 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC20.12■□□□□ 0.81
CBX8Q9HC52 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CBX8Q9HC52 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
CBX8Q9HC52 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CBX8Q9HC52 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CBX8Q9HC52 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CBX8Q9HC52 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CBX8Q9HC52 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.12■□□□□ 0.81
CBX8Q9HC52 RARRES2P10-201ENST00000564312 460 ntBASIC20.12■□□□□ 0.81
CBX8Q9HC52 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
CBX8Q9HC52 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CBX8Q9HC52 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.12■□□□□ 0.81
CBX8Q9HC52 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
CBX8Q9HC52 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CBX8Q9HC52 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CBX8Q9HC52 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CBX8Q9HC52 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CBX8Q9HC52 AC018695.7-201ENST00000624587 2492 ntBASIC20.12■□□□□ 0.81
CBX8Q9HC52 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CBX8Q9HC52 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
CBX8Q9HC52 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CBX8Q9HC52 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CBX8Q9HC52 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CBX8Q9HC52 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CBX8Q9HC52 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.11■□□□□ 0.81
CBX8Q9HC52 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CBX8Q9HC52 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC20.11■□□□□ 0.81
CBX8Q9HC52 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CBX8Q9HC52 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.11■□□□□ 0.81
CBX8Q9HC52 CA15P1-201ENST00000481698 905 ntBASIC20.11■□□□□ 0.81
CBX8Q9HC52 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.11■□□□□ 0.81
CBX8Q9HC52 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.11■□□□□ 0.81
CBX8Q9HC52 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CBX8Q9HC52 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.11■□□□□ 0.81
CBX8Q9HC52 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC20.11■□□□□ 0.81
CBX8Q9HC52 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CBX8Q9HC52 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
CBX8Q9HC52 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC20.11■□□□□ 0.81
CBX8Q9HC52 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CBX8Q9HC52 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.11■□□□□ 0.81
CBX8Q9HC52 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
CBX8Q9HC52 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CBX8Q9HC52 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CBX8Q9HC52 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC20.11■□□□□ 0.81
CBX8Q9HC52 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.11■□□□□ 0.81
CBX8Q9HC52 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC20.1■□□□□ 0.81
CBX8Q9HC52 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CBX8Q9HC52 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CBX8Q9HC52 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CBX8Q9HC52 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CBX8Q9HC52 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC20.1■□□□□ 0.81
CBX8Q9HC52 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CBX8Q9HC52 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CBX8Q9HC52 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CBX8Q9HC52 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CBX8Q9HC52 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC20.1■□□□□ 0.81
CBX8Q9HC52 FAM197Y1-201ENST00000421178 764 ntBASIC20.1■□□□□ 0.81
CBX8Q9HC52 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.1■□□□□ 0.81
CBX8Q9HC52 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CBX8Q9HC52 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.1■□□□□ 0.81
CBX8Q9HC52 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.1■□□□□ 0.81
CBX8Q9HC52 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.1■□□□□ 0.81
CBX8Q9HC52 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CBX8Q9HC52 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CBX8Q9HC52 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CBX8Q9HC52 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CBX8Q9HC52 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CBX8Q9HC52 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CBX8Q9HC52 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.1■□□□□ 0.81
CBX8Q9HC52 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CBX8Q9HC52 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CBX8Q9HC52 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CBX8Q9HC52 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms