Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC168Q8NDH2 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CCDC168Q8NDH2 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC14.99□□□□□ -0.01
CCDC168Q8NDH2 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CCDC168Q8NDH2 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC168Q8NDH2 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC168Q8NDH2 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC168Q8NDH2 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC168Q8NDH2 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.99□□□□□ -0.01
CCDC168Q8NDH2 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CCDC168Q8NDH2 INGX-202ENST00000489074 768 ntBASIC14.99□□□□□ -0.01
CCDC168Q8NDH2 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
CCDC168Q8NDH2 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.99□□□□□ -0.01
CCDC168Q8NDH2 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.99□□□□□ -0.01
CCDC168Q8NDH2 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.99□□□□□ -0.01
CCDC168Q8NDH2 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC168Q8NDH2 MIR4751-201ENST00000578027 74 ntBASIC14.99□□□□□ -0.01
CCDC168Q8NDH2 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14.99□□□□□ -0.01
CCDC168Q8NDH2 AL358472.5-202ENST00000641448 1267 ntBASIC14.99□□□□□ -0.01
CCDC168Q8NDH2 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC168Q8NDH2 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC14.98□□□□□ -0.01
CCDC168Q8NDH2 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC168Q8NDH2 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC168Q8NDH2 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CCDC168Q8NDH2 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC14.98□□□□□ -0.01
CCDC168Q8NDH2 NFYC-AS1-201ENST00000606277 1687 ntBASIC14.98□□□□□ -0.01
CCDC168Q8NDH2 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC168Q8NDH2 UBQLN4P1-201ENST00000461599 1801 ntBASIC14.98□□□□□ -0.01
CCDC168Q8NDH2 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC168Q8NDH2 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC168Q8NDH2 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC168Q8NDH2 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CCDC168Q8NDH2 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC168Q8NDH2 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC168Q8NDH2 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC168Q8NDH2 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.98□□□□□ -0.01
CCDC168Q8NDH2 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.98□□□□□ -0.01
CCDC168Q8NDH2 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.98□□□□□ -0.01
CCDC168Q8NDH2 AC093520.2-201ENST00000561830 333 ntBASIC14.98□□□□□ -0.01
CCDC168Q8NDH2 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC168Q8NDH2 AC004877.2-201ENST00000623941 599 ntBASIC14.98□□□□□ -0.01
CCDC168Q8NDH2 AC010507.1-201ENST00000633895 436 ntBASIC14.98□□□□□ -0.01
CCDC168Q8NDH2 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC168Q8NDH2 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.98□□□□□ -0.01
CCDC168Q8NDH2 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC168Q8NDH2 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
CCDC168Q8NDH2 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC168Q8NDH2 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
CCDC168Q8NDH2 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC168Q8NDH2 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC168Q8NDH2 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
CCDC168Q8NDH2 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC168Q8NDH2 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC168Q8NDH2 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC168Q8NDH2 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC168Q8NDH2 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCDC168Q8NDH2 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.98□□□□□ -0.01
CCDC168Q8NDH2 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.98□□□□□ -0.01
CCDC168Q8NDH2 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.98□□□□□ -0.01
CCDC168Q8NDH2 AL589182.2-201ENST00000619332 1049 ntBASIC14.98□□□□□ -0.01
CCDC168Q8NDH2 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC168Q8NDH2 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC168Q8NDH2 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC168Q8NDH2 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC168Q8NDH2 IGLL3P-201ENST00000412472 434 ntBASIC14.97□□□□□ -0.01
CCDC168Q8NDH2 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC168Q8NDH2 DUX4L27-201ENST00000554796 1261 ntBASIC14.97□□□□□ -0.01
CCDC168Q8NDH2 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.97□□□□□ -0.01
CCDC168Q8NDH2 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC168Q8NDH2 OR7E47P-204ENST00000575924 449 ntBASIC14.97□□□□□ -0.01
CCDC168Q8NDH2 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC14.97□□□□□ -0.01
CCDC168Q8NDH2 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC168Q8NDH2 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CCDC168Q8NDH2 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC168Q8NDH2 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC168Q8NDH2 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC168Q8NDH2 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC14.97□□□□□ -0.01
CCDC168Q8NDH2 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC168Q8NDH2 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CCDC168Q8NDH2 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC168Q8NDH2 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CCDC168Q8NDH2 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC168Q8NDH2 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.97□□□□□ -0.01
CCDC168Q8NDH2 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.97□□□□□ -0.01
CCDC168Q8NDH2 AC091812.2-201ENST00000619081 385 ntBASIC14.97□□□□□ -0.01
CCDC168Q8NDH2 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCDC168Q8NDH2 AC073592.5-201ENST00000624854 528 ntBASIC14.97□□□□□ -0.01
CCDC168Q8NDH2 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC168Q8NDH2 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CCDC168Q8NDH2 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC168Q8NDH2 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC168Q8NDH2 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC168Q8NDH2 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC168Q8NDH2 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC14.96□□□□□ -0.01
CCDC168Q8NDH2 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC168Q8NDH2 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCDC168Q8NDH2 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.96□□□□□ -0.01
CCDC168Q8NDH2 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.96□□□□□ -0.01
CCDC168Q8NDH2 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.96□□□□□ -0.01
CCDC168Q8NDH2 AL627223.1-201ENST00000416693 442 ntBASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms