Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 AC132938.6-201ENST00000623828 1655 ntBASIC22.49■■□□□ 1.19
COL23A1Q86Y22 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC22.49■■□□□ 1.19
COL23A1Q86Y22 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL23A1Q86Y22 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL23A1Q86Y22 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL23A1Q86Y22 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
COL23A1Q86Y22 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
COL23A1Q86Y22 PCDHAC2-203ENST00000615316 3011 ntBASIC22.49■■□□□ 1.19
COL23A1Q86Y22 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
COL23A1Q86Y22 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC22.49■■□□□ 1.19
COL23A1Q86Y22 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC22.49■■□□□ 1.19
COL23A1Q86Y22 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC22.49■■□□□ 1.19
COL23A1Q86Y22 AC010654.1-201ENST00000615722 808 ntBASIC22.49■■□□□ 1.19
COL23A1Q86Y22 CITED2-204ENST00000618718 901 ntTSL 2 BASIC22.49■■□□□ 1.19
COL23A1Q86Y22 SLC25A24-204ENST00000569674 2357 ntBASIC22.49■■□□□ 1.19
COL23A1Q86Y22 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL23A1Q86Y22 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
COL23A1Q86Y22 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
COL23A1Q86Y22 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC22.49■■□□□ 1.19
COL23A1Q86Y22 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
COL23A1Q86Y22 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC22.48■■□□□ 1.19
COL23A1Q86Y22 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
COL23A1Q86Y22 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
COL23A1Q86Y22 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC22.48■■□□□ 1.19
COL23A1Q86Y22 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC22.48■■□□□ 1.19
COL23A1Q86Y22 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
COL23A1Q86Y22 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC22.48■■□□□ 1.19
COL23A1Q86Y22 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
COL23A1Q86Y22 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC22.48■■□□□ 1.19
COL23A1Q86Y22 HLA-DRB6-201ENST00000411500 1235 ntBASIC22.48■■□□□ 1.19
COL23A1Q86Y22 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC22.48■■□□□ 1.19
COL23A1Q86Y22 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC22.48■■□□□ 1.19
COL23A1Q86Y22 RHOQP3-201ENST00000437982 621 ntBASIC22.48■■□□□ 1.19
COL23A1Q86Y22 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC22.48■■□□□ 1.19
COL23A1Q86Y22 RIN3-211ENST00000557762 517 ntTSL 3 BASIC22.48■■□□□ 1.19
COL23A1Q86Y22 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC22.48■■□□□ 1.19
COL23A1Q86Y22 AC105339.1-204ENST00000636249 355 ntBASIC22.48■■□□□ 1.19
COL23A1Q86Y22 AF228730.6-201ENST00000641497 218 ntBASIC22.48■■□□□ 1.19
COL23A1Q86Y22 AC084121.3-201ENST00000641716 218 ntBASIC22.48■■□□□ 1.19
COL23A1Q86Y22 AC105233.6-201ENST00000642093 218 ntBASIC22.48■■□□□ 1.19
COL23A1Q86Y22 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC22.48■■□□□ 1.19
COL23A1Q86Y22 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
COL23A1Q86Y22 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
COL23A1Q86Y22 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
COL23A1Q86Y22 AC025580.3-201ENST00000617932 1424 ntBASIC22.48■■□□□ 1.19
COL23A1Q86Y22 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
COL23A1Q86Y22 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
COL23A1Q86Y22 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
COL23A1Q86Y22 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
COL23A1Q86Y22 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
COL23A1Q86Y22 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC22.47■■□□□ 1.19
COL23A1Q86Y22 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
COL23A1Q86Y22 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
COL23A1Q86Y22 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC22.47■■□□□ 1.19
COL23A1Q86Y22 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
COL23A1Q86Y22 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
COL23A1Q86Y22 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC22.47■■□□□ 1.19
COL23A1Q86Y22 NKTR-203ENST00000442970 646 ntTSL 2 BASIC22.47■■□□□ 1.19
COL23A1Q86Y22 AC074386.1-202ENST00000463561 864 ntBASIC22.47■■□□□ 1.19
COL23A1Q86Y22 DAD1-205ENST00000543337 501 ntTSL 3 BASIC22.47■■□□□ 1.19
COL23A1Q86Y22 DUT-210ENST00000559935 569 ntTSL 3 BASIC22.47■■□□□ 1.19
COL23A1Q86Y22 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC22.47■■□□□ 1.19
COL23A1Q86Y22 AC091812.2-201ENST00000619081 385 ntBASIC22.47■■□□□ 1.19
COL23A1Q86Y22 AC092902.6-201ENST00000641783 218 ntBASIC22.47■■□□□ 1.19
COL23A1Q86Y22 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
COL23A1Q86Y22 NCF1C-201ENST00000438382 1427 ntBASIC22.47■■□□□ 1.19
COL23A1Q86Y22 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC22.47■■□□□ 1.19
COL23A1Q86Y22 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
COL23A1Q86Y22 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC22.46■■□□□ 1.19
COL23A1Q86Y22 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC22.46■■□□□ 1.19
COL23A1Q86Y22 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
COL23A1Q86Y22 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
COL23A1Q86Y22 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
COL23A1Q86Y22 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
COL23A1Q86Y22 SNCG-201ENST00000348795 684 ntTSL 2 BASIC22.46■■□□□ 1.19
COL23A1Q86Y22 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC22.46■■□□□ 1.19
COL23A1Q86Y22 CBR1-202ENST00000399191 838 ntTSL 3 BASIC22.46■■□□□ 1.19
COL23A1Q86Y22 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC22.46■■□□□ 1.19
COL23A1Q86Y22 AC103564.2-201ENST00000432853 1299 ntBASIC22.46■■□□□ 1.19
COL23A1Q86Y22 CD63-210ENST00000550776 870 ntTSL 5 BASIC22.46■■□□□ 1.19
COL23A1Q86Y22 AC190387.1-201ENST00000551683 408 ntBASIC22.46■■□□□ 1.19
COL23A1Q86Y22 OR7E47P-204ENST00000575924 449 ntBASIC22.46■■□□□ 1.19
COL23A1Q86Y22 AL390955.2-201ENST00000603032 514 ntBASIC22.46■■□□□ 1.19
COL23A1Q86Y22 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC22.46■■□□□ 1.19
COL23A1Q86Y22 AL035252.4-201ENST00000624174 288 ntBASIC22.46■■□□□ 1.19
COL23A1Q86Y22 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
COL23A1Q86Y22 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
COL23A1Q86Y22 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
COL23A1Q86Y22 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC22.46■■□□□ 1.19
COL23A1Q86Y22 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC22.46■■□□□ 1.19
COL23A1Q86Y22 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC22.46■■□□□ 1.19
COL23A1Q86Y22 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC22.46■■□□□ 1.19
COL23A1Q86Y22 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
COL23A1Q86Y22 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.19
COL23A1Q86Y22 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
COL23A1Q86Y22 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC22.45■■□□□ 1.19
COL23A1Q86Y22 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
COL23A1Q86Y22 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC22.45■■□□□ 1.18
COL23A1Q86Y22 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
COL23A1Q86Y22 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms