Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RGPD4Q7Z3J3 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
RGPD4Q7Z3J3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RGPD4Q7Z3J3 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RGPD4Q7Z3J3 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RGPD4Q7Z3J3 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RGPD4Q7Z3J3 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RGPD4Q7Z3J3 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC22.66■■□□□ 1.22
RGPD4Q7Z3J3 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RGPD4Q7Z3J3 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RGPD4Q7Z3J3 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC22.65■■□□□ 1.22
RGPD4Q7Z3J3 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
RGPD4Q7Z3J3 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RGPD4Q7Z3J3 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RGPD4Q7Z3J3 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC22.65■■□□□ 1.22
RGPD4Q7Z3J3 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC22.65■■□□□ 1.22
RGPD4Q7Z3J3 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
RGPD4Q7Z3J3 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC22.65■■□□□ 1.22
RGPD4Q7Z3J3 AC055876.3-201ENST00000431496 288 ntBASIC22.65■■□□□ 1.22
RGPD4Q7Z3J3 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC22.65■■□□□ 1.22
RGPD4Q7Z3J3 KLF2P3-201ENST00000451977 1087 ntBASIC22.65■■□□□ 1.22
RGPD4Q7Z3J3 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC22.65■■□□□ 1.22
RGPD4Q7Z3J3 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC22.65■■□□□ 1.22
RGPD4Q7Z3J3 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC22.65■■□□□ 1.22
RGPD4Q7Z3J3 AC138649.4-201ENST00000612222 287 ntBASIC22.65■■□□□ 1.22
RGPD4Q7Z3J3 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC22.65■■□□□ 1.22
RGPD4Q7Z3J3 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RGPD4Q7Z3J3 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC22.64■■□□□ 1.22
RGPD4Q7Z3J3 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.22
RGPD4Q7Z3J3 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
RGPD4Q7Z3J3 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RGPD4Q7Z3J3 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
RGPD4Q7Z3J3 NABP1-203ENST00000409510 843 ntTSL 5 BASIC22.64■■□□□ 1.22
RGPD4Q7Z3J3 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.22
RGPD4Q7Z3J3 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC22.64■■□□□ 1.22
RGPD4Q7Z3J3 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC22.64■■□□□ 1.22
RGPD4Q7Z3J3 AP005018.1-201ENST00000525475 301 ntBASIC22.64■■□□□ 1.22
RGPD4Q7Z3J3 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC22.64■■□□□ 1.22
RGPD4Q7Z3J3 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RGPD4Q7Z3J3 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
RGPD4Q7Z3J3 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.22
RGPD4Q7Z3J3 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC22.64■■□□□ 1.21
RGPD4Q7Z3J3 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
RGPD4Q7Z3J3 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
RGPD4Q7Z3J3 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RGPD4Q7Z3J3 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
RGPD4Q7Z3J3 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC22.64■■□□□ 1.21
RGPD4Q7Z3J3 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC22.63■■□□□ 1.21
RGPD4Q7Z3J3 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RGPD4Q7Z3J3 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RGPD4Q7Z3J3 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
RGPD4Q7Z3J3 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RGPD4Q7Z3J3 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC22.63■■□□□ 1.21
RGPD4Q7Z3J3 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RGPD4Q7Z3J3 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RGPD4Q7Z3J3 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC22.63■■□□□ 1.21
RGPD4Q7Z3J3 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
RGPD4Q7Z3J3 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RGPD4Q7Z3J3 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RGPD4Q7Z3J3 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RGPD4Q7Z3J3 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RGPD4Q7Z3J3 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC22.63■■□□□ 1.21
RGPD4Q7Z3J3 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
RGPD4Q7Z3J3 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RGPD4Q7Z3J3 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RGPD4Q7Z3J3 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC22.63■■□□□ 1.21
RGPD4Q7Z3J3 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RGPD4Q7Z3J3 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
RGPD4Q7Z3J3 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RGPD4Q7Z3J3 AC092667.1-201ENST00000434301 2586 ntBASIC22.62■■□□□ 1.21
RGPD4Q7Z3J3 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RGPD4Q7Z3J3 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
RGPD4Q7Z3J3 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC22.62■■□□□ 1.21
RGPD4Q7Z3J3 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RGPD4Q7Z3J3 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC22.62■■□□□ 1.21
RGPD4Q7Z3J3 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RGPD4Q7Z3J3 WRB-204ENST00000398753 699 ntTSL 3 BASIC22.62■■□□□ 1.21
RGPD4Q7Z3J3 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC22.62■■□□□ 1.21
RGPD4Q7Z3J3 GPS2P2-201ENST00000430745 888 ntBASIC22.62■■□□□ 1.21
RGPD4Q7Z3J3 TIMM8BP1-201ENST00000452384 211 ntBASIC22.62■■□□□ 1.21
RGPD4Q7Z3J3 AC069335.1-201ENST00000489972 472 ntBASIC22.62■■□□□ 1.21
RGPD4Q7Z3J3 CXCL1P1-201ENST00000502804 216 ntBASIC22.62■■□□□ 1.21
RGPD4Q7Z3J3 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RGPD4Q7Z3J3 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC22.62■■□□□ 1.21
RGPD4Q7Z3J3 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC22.62■■□□□ 1.21
RGPD4Q7Z3J3 NOP2-220ENST00000545915 630 ntTSL 2 BASIC22.62■■□□□ 1.21
RGPD4Q7Z3J3 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC22.62■■□□□ 1.21
RGPD4Q7Z3J3 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC22.62■■□□□ 1.21
RGPD4Q7Z3J3 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
RGPD4Q7Z3J3 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC22.62■■□□□ 1.21
RGPD4Q7Z3J3 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC22.62■■□□□ 1.21
RGPD4Q7Z3J3 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
RGPD4Q7Z3J3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RGPD4Q7Z3J3 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC22.61■■□□□ 1.21
RGPD4Q7Z3J3 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC22.61■■□□□ 1.21
RGPD4Q7Z3J3 BASP1P1-201ENST00000430708 665 ntBASIC22.61■■□□□ 1.21
RGPD4Q7Z3J3 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC22.61■■□□□ 1.21
RGPD4Q7Z3J3 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RGPD4Q7Z3J3 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RGPD4Q7Z3J3 AC140878.1-201ENST00000565277 250 ntBASIC22.61■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms