Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.31■□□□□ 0.68
VCPP55072 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.31■□□□□ 0.68
VCPP55072 AP001005.1-201ENST00000571755 1248 ntBASIC19.31■□□□□ 0.68
VCPP55072 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.31■□□□□ 0.68
VCPP55072 AL355385.1-201ENST00000606123 409 ntBASIC19.31■□□□□ 0.68
VCPP55072 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.31■□□□□ 0.68
VCPP55072 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.31■□□□□ 0.68
VCPP55072 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VCPP55072 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
VCPP55072 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
VCPP55072 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
VCPP55072 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VCPP55072 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
VCPP55072 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VCPP55072 AL109659.2-201ENST00000606809 1674 ntBASIC19.3■□□□□ 0.68
VCPP55072 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VCPP55072 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.3■□□□□ 0.68
VCPP55072 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VCPP55072 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.3■□□□□ 0.68
VCPP55072 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VCPP55072 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VCPP55072 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VCPP55072 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.3■□□□□ 0.68
VCPP55072 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC19.3■□□□□ 0.68
VCPP55072 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.3■□□□□ 0.68
VCPP55072 AC104819.1-201ENST00000504587 486 ntBASIC19.3■□□□□ 0.68
VCPP55072 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.3■□□□□ 0.68
VCPP55072 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.3■□□□□ 0.68
VCPP55072 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.3■□□□□ 0.68
VCPP55072 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.3■□□□□ 0.68
VCPP55072 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.3■□□□□ 0.68
VCPP55072 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VCPP55072 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
VCPP55072 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
VCPP55072 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.3■□□□□ 0.68
VCPP55072 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.3■□□□□ 0.68
VCPP55072 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
VCPP55072 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VCPP55072 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
VCPP55072 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
VCPP55072 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.3■□□□□ 0.68
VCPP55072 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.3■□□□□ 0.68
VCPP55072 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
VCPP55072 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.3■□□□□ 0.68
VCPP55072 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.29■□□□□ 0.68
VCPP55072 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.29■□□□□ 0.68
VCPP55072 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.29■□□□□ 0.68
VCPP55072 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
VCPP55072 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VCPP55072 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
VCPP55072 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VCPP55072 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
VCPP55072 AC112777.1-201ENST00000540175 1423 ntBASIC19.29■□□□□ 0.68
VCPP55072 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VCPP55072 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VCPP55072 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
VCPP55072 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VCPP55072 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
VCPP55072 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
VCPP55072 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.29■□□□□ 0.68
VCPP55072 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.29■□□□□ 0.68
VCPP55072 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.29■□□□□ 0.68
VCPP55072 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.29■□□□□ 0.68
VCPP55072 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.29■□□□□ 0.68
VCPP55072 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.29■□□□□ 0.68
VCPP55072 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.29■□□□□ 0.68
VCPP55072 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VCPP55072 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VCPP55072 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
VCPP55072 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VCPP55072 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VCPP55072 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
VCPP55072 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
VCPP55072 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VCPP55072 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.28■□□□□ 0.68
VCPP55072 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
VCPP55072 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VCPP55072 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VCPP55072 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
VCPP55072 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VCPP55072 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VCPP55072 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VCPP55072 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VCPP55072 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.28■□□□□ 0.68
VCPP55072 NOC2LP2-201ENST00000407594 1944 ntBASIC19.28■□□□□ 0.68
VCPP55072 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VCPP55072 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.28■□□□□ 0.68
VCPP55072 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
VCPP55072 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VCPP55072 BX842568.4-201ENST00000421222 227 ntBASIC19.28■□□□□ 0.68
VCPP55072 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.28■□□□□ 0.68
VCPP55072 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.28■□□□□ 0.68
VCPP55072 SEC1P-202ENST00000473944 940 ntBASIC19.28■□□□□ 0.68
VCPP55072 RNF126P1-202ENST00000569893 925 ntBASIC19.28■□□□□ 0.68
VCPP55072 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.28■□□□□ 0.68
VCPP55072 TP73-AS1-207ENST00000624167 988 ntBASIC19.28■□□□□ 0.68
VCPP55072 AC112497.1-201ENST00000624824 639 ntBASIC19.28■□□□□ 0.68
VCPP55072 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VCPP55072 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VCPP55072 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms