Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sdc2P43407 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.97■□□□□ 0.31
Sdc2P43407 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sdc2P43407 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sdc2P43407 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Sdc2P43407 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sdc2P43407 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC16.96■□□□□ 0.31
Sdc2P43407 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sdc2P43407 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.96■□□□□ 0.31
Sdc2P43407 Gm45293-201ENSMUST00000209754 1812 ntBASIC16.96■□□□□ 0.31
Sdc2P43407 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sdc2P43407 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sdc2P43407 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sdc2P43407 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Sdc2P43407 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.96■□□□□ 0.31
Sdc2P43407 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Sdc2P43407 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.96■□□□□ 0.31
Sdc2P43407 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Sdc2P43407 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.96■□□□□ 0.31
Sdc2P43407 Gm6296-201ENSMUST00000222599 943 ntBASIC16.96■□□□□ 0.31
Sdc2P43407 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sdc2P43407 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sdc2P43407 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC16.96■□□□□ 0.31
Sdc2P43407 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Sdc2P43407 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sdc2P43407 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sdc2P43407 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sdc2P43407 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC16.96■□□□□ 0.3
Sdc2P43407 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Sdc2P43407 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sdc2P43407 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sdc2P43407 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sdc2P43407 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.95■□□□□ 0.3
Sdc2P43407 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sdc2P43407 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Sdc2P43407 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sdc2P43407 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Sdc2P43407 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sdc2P43407 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sdc2P43407 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sdc2P43407 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sdc2P43407 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sdc2P43407 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Sdc2P43407 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.95■□□□□ 0.3
Sdc2P43407 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.95■□□□□ 0.3
Sdc2P43407 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.95■□□□□ 0.3
Sdc2P43407 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Sdc2P43407 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Sdc2P43407 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC16.95■□□□□ 0.3
Sdc2P43407 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sdc2P43407 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sdc2P43407 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sdc2P43407 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sdc2P43407 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.94■□□□□ 0.3
Sdc2P43407 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sdc2P43407 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sdc2P43407 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sdc2P43407 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sdc2P43407 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sdc2P43407 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Sdc2P43407 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sdc2P43407 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.94■□□□□ 0.3
Sdc2P43407 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sdc2P43407 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sdc2P43407 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.94■□□□□ 0.3
Sdc2P43407 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.94■□□□□ 0.3
Sdc2P43407 Celf4-206ENSMUST00000224553 1729 ntBASIC16.94■□□□□ 0.3
Sdc2P43407 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sdc2P43407 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sdc2P43407 Gm11780-201ENSMUST00000136880 516 ntBASIC16.94■□□□□ 0.3
Sdc2P43407 Gm7977-201ENSMUST00000193787 748 ntBASIC16.94■□□□□ 0.3
Sdc2P43407 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.94■□□□□ 0.3
Sdc2P43407 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.94■□□□□ 0.3
Sdc2P43407 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sdc2P43407 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sdc2P43407 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sdc2P43407 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sdc2P43407 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sdc2P43407 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16.94■□□□□ 0.3
Sdc2P43407 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Sdc2P43407 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Sdc2P43407 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sdc2P43407 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sdc2P43407 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.94■□□□□ 0.3
Sdc2P43407 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sdc2P43407 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sdc2P43407 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sdc2P43407 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sdc2P43407 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC16.93■□□□□ 0.3
Sdc2P43407 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.93■□□□□ 0.3
Sdc2P43407 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.93■□□□□ 0.3
Sdc2P43407 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sdc2P43407 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sdc2P43407 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Sdc2P43407 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sdc2P43407 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sdc2P43407 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sdc2P43407 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.93■□□□□ 0.3
Sdc2P43407 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Sdc2P43407 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms