Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
SLC1A3P43003 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC1A3P43003 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC1A3P43003 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC1A3P43003 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC1A3P43003 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC1A3P43003 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC1A3P43003 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC1A3P43003 AC073508.3-201ENST00000619697 1419 ntBASIC16.61■□□□□ 0.25
SLC1A3P43003 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC1A3P43003 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SLC1A3P43003 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC1A3P43003 AC012313.1-201ENST00000593393 3059 ntBASIC16.6■□□□□ 0.25
SLC1A3P43003 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC1A3P43003 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC1A3P43003 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
SLC1A3P43003 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SLC1A3P43003 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC1A3P43003 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC1A3P43003 PVRIG2P-201ENST00000435460 978 ntBASIC16.6■□□□□ 0.25
SLC1A3P43003 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.6■□□□□ 0.25
SLC1A3P43003 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
SLC1A3P43003 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.6■□□□□ 0.25
SLC1A3P43003 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.6■□□□□ 0.25
SLC1A3P43003 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.6■□□□□ 0.25
SLC1A3P43003 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.6■□□□□ 0.25
SLC1A3P43003 AC008687.5-201ENST00000593746 558 ntBASIC16.6■□□□□ 0.25
SLC1A3P43003 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
SLC1A3P43003 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
SLC1A3P43003 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
SLC1A3P43003 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
SLC1A3P43003 AL023973.1-201ENST00000624619 620 ntBASIC16.6■□□□□ 0.25
SLC1A3P43003 AL157888.1-201ENST00000631930 593 ntBASIC16.6■□□□□ 0.25
SLC1A3P43003 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC1A3P43003 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SLC1A3P43003 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC1A3P43003 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.6■□□□□ 0.25
SLC1A3P43003 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC1A3P43003 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC1A3P43003 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC1A3P43003 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
SLC1A3P43003 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC1A3P43003 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC1A3P43003 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC1A3P43003 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC1A3P43003 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
SLC1A3P43003 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SLC1A3P43003 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A3P43003 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.59■□□□□ 0.25
SLC1A3P43003 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A3P43003 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A3P43003 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A3P43003 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
SLC1A3P43003 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A3P43003 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.59■□□□□ 0.25
SLC1A3P43003 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.59■□□□□ 0.25
SLC1A3P43003 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.59■□□□□ 0.25
SLC1A3P43003 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC1A3P43003 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.59■□□□□ 0.25
SLC1A3P43003 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC1A3P43003 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A3P43003 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A3P43003 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SLC1A3P43003 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A3P43003 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A3P43003 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A3P43003 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC1A3P43003 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC1A3P43003 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.59■□□□□ 0.25
SLC1A3P43003 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A3P43003 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC1A3P43003 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SLC1A3P43003 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
SLC1A3P43003 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
SLC1A3P43003 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
SLC1A3P43003 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SLC1A3P43003 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
SLC1A3P43003 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SLC1A3P43003 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SLC1A3P43003 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.58■□□□□ 0.25
SLC1A3P43003 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
SLC1A3P43003 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
SLC1A3P43003 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
SLC1A3P43003 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC1A3P43003 AC005521.1-201ENST00000393351 872 ntBASIC16.58■□□□□ 0.24
SLC1A3P43003 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC1A3P43003 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SLC1A3P43003 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.58■□□□□ 0.24
SLC1A3P43003 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
SLC1A3P43003 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
SLC1A3P43003 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
SLC1A3P43003 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
SLC1A3P43003 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.58■□□□□ 0.24
SLC1A3P43003 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SLC1A3P43003 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC1A3P43003 SIRPAP1-201ENST00000448467 1770 ntBASIC16.58■□□□□ 0.24
SLC1A3P43003 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.58■□□□□ 0.24
SLC1A3P43003 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.58■□□□□ 0.24
SLC1A3P43003 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SLC1A3P43003 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms