Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.98■■□□□ 1.11
KCNA3P22001 AC148477.5-201ENST00000625164 1645 ntBASIC21.98■■□□□ 1.11
KCNA3P22001 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
KCNA3P22001 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
KCNA3P22001 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
KCNA3P22001 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
KCNA3P22001 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
KCNA3P22001 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
KCNA3P22001 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
KCNA3P22001 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
KCNA3P22001 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
KCNA3P22001 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
KCNA3P22001 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
KCNA3P22001 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
KCNA3P22001 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
KCNA3P22001 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC21.97■■□□□ 1.11
KCNA3P22001 AL020989.1-201ENST00000422979 469 ntBASIC21.97■■□□□ 1.11
KCNA3P22001 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC21.97■■□□□ 1.11
KCNA3P22001 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
KCNA3P22001 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC21.97■■□□□ 1.11
KCNA3P22001 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC21.97■■□□□ 1.11
KCNA3P22001 OR7E47P-204ENST00000575924 449 ntBASIC21.97■■□□□ 1.11
KCNA3P22001 AL390955.2-201ENST00000603032 514 ntBASIC21.97■■□□□ 1.11
KCNA3P22001 AC105339.1-204ENST00000636249 355 ntBASIC21.97■■□□□ 1.11
KCNA3P22001 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
KCNA3P22001 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
KCNA3P22001 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
KCNA3P22001 BCAR1-209ENST00000546196 1340 ntBASIC21.97■■□□□ 1.11
KCNA3P22001 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC21.97■■□□□ 1.11
KCNA3P22001 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC21.97■■□□□ 1.11
KCNA3P22001 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.97■■□□□ 1.11
KCNA3P22001 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.97■■□□□ 1.11
KCNA3P22001 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
KCNA3P22001 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC21.97■■□□□ 1.11
KCNA3P22001 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC21.97■■□□□ 1.11
KCNA3P22001 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
KCNA3P22001 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.96■■□□□ 1.11
KCNA3P22001 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
KCNA3P22001 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.96■■□□□ 1.11
KCNA3P22001 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
KCNA3P22001 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
KCNA3P22001 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
KCNA3P22001 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
KCNA3P22001 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC21.96■■□□□ 1.11
KCNA3P22001 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
KCNA3P22001 CBR1-202ENST00000399191 838 ntTSL 3 BASIC21.96■■□□□ 1.11
KCNA3P22001 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC21.96■■□□□ 1.11
KCNA3P22001 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
KCNA3P22001 AC092902.6-201ENST00000641783 218 ntBASIC21.96■■□□□ 1.11
KCNA3P22001 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.96■■□□□ 1.11
KCNA3P22001 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC21.96■■□□□ 1.11
KCNA3P22001 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
KCNA3P22001 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
KCNA3P22001 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
KCNA3P22001 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.11
KCNA3P22001 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
KCNA3P22001 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
KCNA3P22001 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
KCNA3P22001 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
KCNA3P22001 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
KCNA3P22001 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC21.95■■□□□ 1.1
KCNA3P22001 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC21.95■■□□□ 1.1
KCNA3P22001 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC21.95■■□□□ 1.1
KCNA3P22001 AC004835.2-201ENST00000603762 682 ntBASIC21.95■■□□□ 1.1
KCNA3P22001 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC21.95■■□□□ 1.1
KCNA3P22001 AC010654.1-201ENST00000615722 808 ntBASIC21.95■■□□□ 1.1
KCNA3P22001 AF228730.6-201ENST00000641497 218 ntBASIC21.95■■□□□ 1.1
KCNA3P22001 AC084121.3-201ENST00000641716 218 ntBASIC21.95■■□□□ 1.1
KCNA3P22001 AC105233.6-201ENST00000642093 218 ntBASIC21.95■■□□□ 1.1
KCNA3P22001 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC21.95■■□□□ 1.1
KCNA3P22001 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
KCNA3P22001 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.95■■□□□ 1.1
KCNA3P22001 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.95■■□□□ 1.1
KCNA3P22001 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC21.95■■□□□ 1.1
KCNA3P22001 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
KCNA3P22001 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
KCNA3P22001 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC21.95■■□□□ 1.1
KCNA3P22001 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC21.95■■□□□ 1.1
KCNA3P22001 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC21.95■■□□□ 1.1
KCNA3P22001 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC21.95■■□□□ 1.1
KCNA3P22001 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
KCNA3P22001 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.94■■□□□ 1.1
KCNA3P22001 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
KCNA3P22001 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
KCNA3P22001 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
KCNA3P22001 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
KCNA3P22001 KLK8-202ENST00000320838 456 ntTSL 5 BASIC21.94■■□□□ 1.1
KCNA3P22001 COPE-202ENST00000349893 948 ntTSL 2 BASIC21.94■■□□□ 1.1
KCNA3P22001 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC21.94■■□□□ 1.1
KCNA3P22001 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC21.94■■□□□ 1.1
KCNA3P22001 AC074386.1-202ENST00000463561 864 ntBASIC21.94■■□□□ 1.1
KCNA3P22001 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC21.94■■□□□ 1.1
KCNA3P22001 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC21.94■■□□□ 1.1
KCNA3P22001 SMN2-210ENST00000511812 867 ntTSL 2 BASIC21.94■■□□□ 1.1
KCNA3P22001 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC21.94■■□□□ 1.1
KCNA3P22001 DUT-210ENST00000559935 569 ntTSL 3 BASIC21.94■■□□□ 1.1
KCNA3P22001 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
KCNA3P22001 TK1-204ENST00000590430 683 ntTSL 3 BASIC21.94■■□□□ 1.1
KCNA3P22001 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
KCNA3P22001 AC091812.2-201ENST00000619081 385 ntBASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms