Protein–RNA interactions for Protein: O08785

Clock, Circadian locomoter output cycles protein kaput, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClockO08785 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClockO08785 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.38□□□□□ -0.11
ClockO08785 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ClockO08785 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ClockO08785 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ClockO08785 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClockO08785 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClockO08785 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClockO08785 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClockO08785 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ClockO08785 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClockO08785 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
ClockO08785 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
ClockO08785 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
ClockO08785 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClockO08785 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
ClockO08785 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.37□□□□□ -0.11
ClockO08785 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClockO08785 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClockO08785 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
ClockO08785 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClockO08785 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ClockO08785 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
ClockO08785 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.37□□□□□ -0.11
ClockO08785 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClockO08785 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClockO08785 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClockO08785 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClockO08785 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ClockO08785 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClockO08785 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClockO08785 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.37□□□□□ -0.11
ClockO08785 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ClockO08785 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClockO08785 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClockO08785 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClockO08785 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ClockO08785 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ClockO08785 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClockO08785 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.36□□□□□ -0.11
ClockO08785 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClockO08785 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClockO08785 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClockO08785 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClockO08785 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClockO08785 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClockO08785 Gm15565-201ENSMUST00000118890 427 ntBASIC14.36□□□□□ -0.11
ClockO08785 Gm27389-201ENSMUST00000183622 195 ntBASIC14.36□□□□□ -0.11
ClockO08785 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.36□□□□□ -0.11
ClockO08785 Gm10252-201ENSMUST00000209541 832 ntBASIC14.36□□□□□ -0.11
ClockO08785 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.36□□□□□ -0.11
ClockO08785 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
ClockO08785 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.36□□□□□ -0.11
ClockO08785 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClockO08785 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClockO08785 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClockO08785 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClockO08785 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClockO08785 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClockO08785 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ClockO08785 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClockO08785 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ClockO08785 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.36□□□□□ -0.11
ClockO08785 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClockO08785 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.35□□□□□ -0.11
ClockO08785 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClockO08785 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.35□□□□□ -0.11
ClockO08785 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ClockO08785 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClockO08785 Gm6433-201ENSMUST00000118634 875 ntBASIC14.35□□□□□ -0.11
ClockO08785 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.35□□□□□ -0.11
ClockO08785 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
ClockO08785 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
ClockO08785 Mir6982-201ENSMUST00000184354 68 ntBASIC14.35□□□□□ -0.11
ClockO08785 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
ClockO08785 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC14.35□□□□□ -0.11
ClockO08785 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.35□□□□□ -0.11
ClockO08785 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClockO08785 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClockO08785 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
ClockO08785 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClockO08785 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClockO08785 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClockO08785 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
ClockO08785 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClockO08785 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
ClockO08785 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClockO08785 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.35□□□□□ -0.11
ClockO08785 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClockO08785 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.35□□□□□ -0.11
ClockO08785 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClockO08785 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
ClockO08785 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ClockO08785 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.35□□□□□ -0.11
ClockO08785 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
ClockO08785 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.34□□□□□ -0.11
ClockO08785 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ClockO08785 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
ClockO08785 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ClockO08785 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms