Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Col6a5A6H584 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Col6a5A6H584 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col6a5A6H584 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col6a5A6H584 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Col6a5A6H584 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC11.31□□□□□ -0.6
Col6a5A6H584 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col6a5A6H584 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col6a5A6H584 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col6a5A6H584 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col6a5A6H584 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col6a5A6H584 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Col6a5A6H584 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col6a5A6H584 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col6a5A6H584 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Col6a5A6H584 Gm29199-201ENSMUST00000187766 775 ntBASIC11.31□□□□□ -0.6
Col6a5A6H584 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col6a5A6H584 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC11.31□□□□□ -0.6
Col6a5A6H584 Gm9182-201ENSMUST00000217829 639 ntBASIC11.31□□□□□ -0.6
Col6a5A6H584 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC11.31□□□□□ -0.6
Col6a5A6H584 Gm7446-201ENSMUST00000221035 1240 ntBASIC11.31□□□□□ -0.6
Col6a5A6H584 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Col6a5A6H584 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Col6a5A6H584 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Col6a5A6H584 Gm10012-201ENSMUST00000078252 192 ntBASIC11.31□□□□□ -0.6
Col6a5A6H584 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col6a5A6H584 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col6a5A6H584 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col6a5A6H584 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Col6a5A6H584 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.31□□□□□ -0.6
Col6a5A6H584 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a5A6H584 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a5A6H584 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.3□□□□□ -0.6
Col6a5A6H584 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a5A6H584 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC11.3□□□□□ -0.6
Col6a5A6H584 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a5A6H584 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a5A6H584 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a5A6H584 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a5A6H584 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC11.3□□□□□ -0.6
Col6a5A6H584 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a5A6H584 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a5A6H584 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a5A6H584 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a5A6H584 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.3□□□□□ -0.6
Col6a5A6H584 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a5A6H584 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a5A6H584 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a5A6H584 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a5A6H584 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a5A6H584 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a5A6H584 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a5A6H584 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC11.3□□□□□ -0.6
Col6a5A6H584 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a5A6H584 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a5A6H584 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a5A6H584 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a5A6H584 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a5A6H584 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a5A6H584 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a5A6H584 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a5A6H584 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a5A6H584 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC11.3□□□□□ -0.6
Col6a5A6H584 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a5A6H584 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a5A6H584 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a5A6H584 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a5A6H584 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Col6a5A6H584 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a5A6H584 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a5A6H584 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a5A6H584 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a5A6H584 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a5A6H584 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a5A6H584 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Col6a5A6H584 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Col6a5A6H584 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC11.29□□□□□ -0.6
Col6a5A6H584 Mir1894-201ENSMUST00000122802 81 ntBASIC11.29□□□□□ -0.6
Col6a5A6H584 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a5A6H584 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC11.29□□□□□ -0.6
Col6a5A6H584 Gm43138-201ENSMUST00000199123 708 ntBASIC11.29□□□□□ -0.6
Col6a5A6H584 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a5A6H584 Gm3695-201ENSMUST00000087222 1009 ntBASIC11.29□□□□□ -0.6
Col6a5A6H584 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a5A6H584 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a5A6H584 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a5A6H584 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a5A6H584 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a5A6H584 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a5A6H584 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a5A6H584 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a5A6H584 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Col6a5A6H584 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a5A6H584 Gm5912-201ENSMUST00000122282 1438 ntBASIC11.29□□□□□ -0.6
Col6a5A6H584 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a5A6H584 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Col6a5A6H584 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC11.29□□□□□ -0.6
Col6a5A6H584 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Col6a5A6H584 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Col6a5A6H584 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms