Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC27.19■■□□□ 1.94
COL17A1Q9UMD9 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC27.19■■□□□ 1.94
COL17A1Q9UMD9 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC27.19■■□□□ 1.94
COL17A1Q9UMD9 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC27.19■■□□□ 1.94
COL17A1Q9UMD9 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC27.19■■□□□ 1.94
COL17A1Q9UMD9 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC27.19■■□□□ 1.94
COL17A1Q9UMD9 AC009093.7-201ENST00000623853 1223 ntBASIC27.19■■□□□ 1.94
COL17A1Q9UMD9 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
COL17A1Q9UMD9 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
COL17A1Q9UMD9 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
COL17A1Q9UMD9 AL121761.2-201ENST00000598007 1648 ntBASIC27.18■■□□□ 1.94
COL17A1Q9UMD9 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
COL17A1Q9UMD9 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC27.18■■□□□ 1.94
COL17A1Q9UMD9 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
COL17A1Q9UMD9 AC073130.3-201ENST00000624389 2278 ntBASIC27.18■■□□□ 1.94
COL17A1Q9UMD9 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
COL17A1Q9UMD9 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
COL17A1Q9UMD9 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
COL17A1Q9UMD9 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
COL17A1Q9UMD9 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
COL17A1Q9UMD9 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
COL17A1Q9UMD9 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
COL17A1Q9UMD9 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
COL17A1Q9UMD9 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
COL17A1Q9UMD9 AP002414.1-201ENST00000391405 1147 ntBASIC27.18■■□□□ 1.94
COL17A1Q9UMD9 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC27.18■■□□□ 1.94
COL17A1Q9UMD9 TSPY16P-201ENST00000449843 468 ntBASIC27.18■■□□□ 1.94
COL17A1Q9UMD9 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC27.18■■□□□ 1.94
COL17A1Q9UMD9 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC27.18■■□□□ 1.94
COL17A1Q9UMD9 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
COL17A1Q9UMD9 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
COL17A1Q9UMD9 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC27.17■■□□□ 1.94
COL17A1Q9UMD9 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
COL17A1Q9UMD9 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC27.17■■□□□ 1.94
COL17A1Q9UMD9 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC27.17■■□□□ 1.94
COL17A1Q9UMD9 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC27.17■■□□□ 1.94
COL17A1Q9UMD9 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
COL17A1Q9UMD9 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
COL17A1Q9UMD9 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC27.17■■□□□ 1.94
COL17A1Q9UMD9 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
COL17A1Q9UMD9 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
COL17A1Q9UMD9 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
COL17A1Q9UMD9 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC27.17■■□□□ 1.94
COL17A1Q9UMD9 AC074386.1-202ENST00000463561 864 ntBASIC27.17■■□□□ 1.94
COL17A1Q9UMD9 INGX-202ENST00000489074 768 ntBASIC27.17■■□□□ 1.94
COL17A1Q9UMD9 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC27.17■■□□□ 1.94
COL17A1Q9UMD9 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC27.17■■□□□ 1.94
COL17A1Q9UMD9 AC051619.7-201ENST00000568314 623 ntBASIC27.17■■□□□ 1.94
COL17A1Q9UMD9 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
COL17A1Q9UMD9 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
COL17A1Q9UMD9 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC27.17■■□□□ 1.94
COL17A1Q9UMD9 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC27.17■■□□□ 1.94
COL17A1Q9UMD9 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC27.17■■□□□ 1.94
COL17A1Q9UMD9 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
COL17A1Q9UMD9 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
COL17A1Q9UMD9 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
COL17A1Q9UMD9 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
COL17A1Q9UMD9 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC27.16■■□□□ 1.94
COL17A1Q9UMD9 AC025580.3-201ENST00000617932 1424 ntBASIC27.16■■□□□ 1.94
COL17A1Q9UMD9 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
COL17A1Q9UMD9 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
COL17A1Q9UMD9 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC27.16■■□□□ 1.94
COL17A1Q9UMD9 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
COL17A1Q9UMD9 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
COL17A1Q9UMD9 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
COL17A1Q9UMD9 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
COL17A1Q9UMD9 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
COL17A1Q9UMD9 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC27.16■■□□□ 1.94
COL17A1Q9UMD9 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC27.16■■□□□ 1.94
COL17A1Q9UMD9 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC27.16■■□□□ 1.94
COL17A1Q9UMD9 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
COL17A1Q9UMD9 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
COL17A1Q9UMD9 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
COL17A1Q9UMD9 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
COL17A1Q9UMD9 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
COL17A1Q9UMD9 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
COL17A1Q9UMD9 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC27.16■■□□□ 1.94
COL17A1Q9UMD9 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
COL17A1Q9UMD9 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
COL17A1Q9UMD9 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC27.15■■□□□ 1.94
COL17A1Q9UMD9 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC27.15■■□□□ 1.94
COL17A1Q9UMD9 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
COL17A1Q9UMD9 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC27.15■■□□□ 1.94
COL17A1Q9UMD9 CYB561-217ENST00000582997 877 ntTSL 5 BASIC27.15■■□□□ 1.94
COL17A1Q9UMD9 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC27.15■■□□□ 1.94
COL17A1Q9UMD9 HFE2-206ENST00000634927 506 ntTSL 4 BASIC27.15■■□□□ 1.94
COL17A1Q9UMD9 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
COL17A1Q9UMD9 ME2-218ENST00000640965 2476 ntTSL 5 BASIC27.15■■□□□ 1.94
COL17A1Q9UMD9 KRT8P47-201ENST00000604727 1398 ntBASIC27.15■■□□□ 1.94
COL17A1Q9UMD9 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
COL17A1Q9UMD9 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC27.14■■□□□ 1.94
COL17A1Q9UMD9 EDF1-203ENST00000371649 790 ntTSL 2 BASIC27.14■■□□□ 1.94
COL17A1Q9UMD9 AC055876.3-201ENST00000431496 288 ntBASIC27.14■■□□□ 1.94
COL17A1Q9UMD9 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC27.14■■□□□ 1.94
COL17A1Q9UMD9 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC27.14■■□□□ 1.94
COL17A1Q9UMD9 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC27.14■■□□□ 1.94
COL17A1Q9UMD9 AC138649.4-201ENST00000612222 287 ntBASIC27.14■■□□□ 1.94
COL17A1Q9UMD9 MIR6752-201ENST00000618442 71 ntBASIC27.14■■□□□ 1.94
COL17A1Q9UMD9 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
COL17A1Q9UMD9 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms